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BaseInfo

ncRNA ID novel_gma_miR3134
Species Glycine max
Class miRNA
Genome position Chr18:22719873-22720018 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 21
Mature sequence(if miRNA) 1 - UCCAAUAAGAACAUGACACGU - 21
Stem-loop(if miRNA) --       A                  U                       -UC   GAAAACAAUAAUUCA
  GUGUCAU UUCUUAUUGGAUGAUGAC GUCAUGUGUCAUGUUCUGAUUGG   AAU               U
  ||||||| |||||||||||||||||| |||||||||||||||||||||||   |||               U
  CACAGUA AAGAAUAACCUACUACUG CAGUACACAGUACAAGACUAACC   AGU               U
UG       C                  C                       UAC   UGAGGUACUUUUUAC
Stem-loop sequence GUGUCAUAUUCUUAUUGGAUGAUGACUGUCAUGUGUCAUGUUCUGAUUGGUCAAUGAAAACAAUAAUUCAUUUCAUUUUUCAUGGAGUUGACAUCCAAUCAGAACAUGACACAUGACCGUCAUCAUCCAAUAAGAACAUGACACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003533235.3
ncRNA:21   UGCACAGUACAAGAAUAACCU   1
  **|*||||*||||||||||||
targets:2895   UGGCGUCACGUUCUUAUUGGA   2915

2.5 PREDICTED: Glycine max receptor-like protein kinase HSL1 (LOC100789972), mRNA receptor-like protein kinase HSL1(LOC100789972) coding protein psRNATarget