ncRNA ID | novel_gma_miR3134 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:22719873-22720018 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCCAAUAAGAACAUGACACGU - 21 |
Stem-loop(if miRNA) |
--       A                  U                       -UC   GAAAACAAUAAUUCA   GUGUCAU UUCUUAUUGGAUGAUGAC GUCAUGUGUCAUGUUCUGAUUGG   AAU               U   ||||||| |||||||||||||||||| |||||||||||||||||||||||   |||               U   CACAGUA AAGAAUAACCUACUACUG CAGUACACAGUACAAGACUAACC   AGU               U UG       C                  C                       UAC   UGAGGUACUUUUUAC |
Stem-loop sequence | GUGUCAUAUUCUUAUUGGAUGAUGACUGUCAUGUGUCAUGUUCUGAUUGGUCAAUGAAAACAAUAAUUCAUUUCAUUUUUCAUGGAGUUGACAUCCAAUCAGAACAUGACACAUGACCGUCAUCAUCCAAUAAGAACAUGACACGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003533235.3 |
|
2.5 | PREDICTED: Glycine max receptor-like protein kinase HSL1 (LOC100789972), mRNA | receptor-like protein kinase HSL1(LOC100789972) | coding protein | psRNATarget |