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BaseInfo

ncRNA ID	novel_gma_miR3133
Species	Glycine max
Class	miRNA
Genome position	Chr18:34805006-34805068 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451670;SRR1451676
Length	20
Mature sequence(if miRNA)	1 - AUGAAAUAUUGAUUUGAGCU - 20
Stem-loop(if miRNA)	--       UG       UAGUAUGUU   U   UUUAGAU  GUGUUUC         GCU G   |||||||  |||||||         ||| A   GAGUUUA  UAUAAAG         CGA G UC       GU       UAAAGUUUU   A
Stem-loop sequence	UUUAGAUUGGUGUUUCUAGUAUGUUGCUUGAGAAGCUUUUGAAAUGAAAUAUUGAUUUGAGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003543429.3	ncRNA:20   UCGAGUUUAGUUAUAAAGUA   1   |*|||||||=|||||||||| targets:236   AUCUCAAAUUAAUAUUUCAU   255 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized membrane protein At1g06890-like (LOC100812221), mRNA	uncharacterized membrane protein At1g06890-like(LOC100812221)	coding protein	psRNATarget
XM_006606417.2	ncRNA:20   UCGAGUUUAGUUAUAAAGUA   1   *|=||||||||||||||*|| targets:655   UGUUCAAAUCAAUAUUUGAU   674 Target Full Sequence	2.5	PREDICTED: Glycine max 5'-3' exoribonuclease 4-like (LOC100817715), transcript variant X3, mRNA	5'-3' exoribonuclease 4-like(LOC100817715)	coding protein	psRNATarget
XM_006606416.2	ncRNA:20   UCGAGUUUAGUUAUAAAGUA   1   *|=||||||||||||||*|| targets:657   UGUUCAAAUCAAUAUUUGAU   676 Target Full Sequence	2.5	PREDICTED: Glycine max 5'-3' exoribonuclease 4-like (LOC100817715), transcript variant X1, mRNA	5'-3' exoribonuclease 4-like(LOC100817715)	coding protein	psRNATarget
XM_006592247.2	ncRNA:20   UCGAGUUUAGUUAUAAAGUA   1   *|*||||||*|||||||||| targets:1337   UGAUCAAAUGAAUAUUUCAU   1356 Target Full Sequence	2.5	PREDICTED: Glycine max histone deacetylase 9 (LOC100796727), transcript variant X2, mRNA	histone deacetylase 9(LOC100796727)	coding protein	psRNATarget
XM_003539766.3	ncRNA:20   UCGAGUUUAGUUAUAAAGUA   1   *|*||||||*|||||||||| targets:1567   UGAUCAAAUGAAUAUUUCAU   1586 Target Full Sequence	2.5	PREDICTED: Glycine max histone deacetylase 9 (LOC100796727), transcript variant X1, mRNA	histone deacetylase 9(LOC100796727)	coding protein	psRNATarget