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BaseInfo

ncRNA ID novel_gma_miR3132
Species Glycine max
Class miRNA
Genome position Chr18:36798340-36798381 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 1 - AGUAAUGAUUGUGCUUCUUU - 20
Stem-loop(if miRNA) AGU   -            U
   GGA CAUAAUUAUUAC U
   ||| |||||||||||| A
   CUU GUGUUAGUAAUG G
UUU   C            A
Stem-loop sequence AGUGGACAUAAUUAUUACUUAGAGUAAUGAUUGUGCUUCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003521293.3
ncRNA:20   UUUCUUCGUGUUAGUAAUGA   1
  =|||||||||||*|||||||
targets:2036   GAAGAAGCACAAGCAUUACU   2055

1.5 PREDICTED: Glycine max eukaryotic translation initiation factor 3 subunit A-like (LOC100803796), transcript variant X1, mRNA eukaryotic translation initiation factor 3 subunit A-like(LOC100803796) coding protein psRNATarget
XM_014773849.1
ncRNA:20   UUUCUUCGUGUUAGUAAUGA   1
  =|||||||||||*|||||||
targets:2083   GAAGAAGCACAAGCAUUACU   2102

1.5 PREDICTED: Glycine max eukaryotic translation initiation factor 3 subunit A-like (LOC100803796), transcript variant X3, mRNA eukaryotic translation initiation factor 3 subunit A-like(LOC100803796) coding protein psRNATarget
XM_006576921.2
ncRNA:20   UUUCUUCGUGUUAGUAAUGA   1
  =|||||||||||*|||||||
targets:2109   GAAGAAGCACAAGCAUUACU   2128

1.5 PREDICTED: Glycine max eukaryotic translation initiation factor 3 subunit A-like (LOC100803796), transcript variant X2, mRNA eukaryotic translation initiation factor 3 subunit A-like(LOC100803796) coding protein psRNATarget