ncRNA ID | novel_gma_miR3126 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:1745303-1745456 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 20 |
Mature sequence(if miRNA) | 135 - UCACGUGUCAUGUUCUUAUU - 154 |
Stem-loop(if miRNA) |
--              C     A       GC                G      ---         AACAACAAUUC   UCACGUGUCAUGUU UUAUU GAUGAUG  UGUCAUGUGUCAUGUU UGAUUG   GUCAAUGAA           A   |||||||||||||| ||||| |||||||  |||||||||||||||| ||||||   |||||||||           U   AGUGCACAGUAUAA AAUAA CUAUUAC  ACAGUGCACAGUACAA ACUAAU   CAGUUGAGG           U AC              A     C       UA                G      UUA         UACUUUCUAUC |
Stem-loop sequence | UCACGUGUCAUGUUCUUAUUAGAUGAUGGCUGUCAUGUGUCAUGUUGUGAUUGGUCAAUGAAAACAACAAUUCAUUCUAUCUUUCAUGGAGUUGACAUUUAAUCAGAACAUGACACGUGACAAUCAUUAUCCAAUAAAAAUAUGACACGUGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK245140.1 |
|
1.0 | Glycine max cDNA, clone: GMFL01-21-P01 | NA | coding protein | psRNATarget | |||||||||
XM_006602607.2 |
|
2.5 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget |