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BaseInfo

ncRNA ID novel_gma_miR3126
Species Glycine max
Class miRNA
Genome position Chr10:1745303-1745456 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 135 - UCACGUGUCAUGUUCUUAUU - 154
Stem-loop(if miRNA) --              C     A       GC                G      ---         AACAACAAUUC
  UCACGUGUCAUGUU UUAUU GAUGAUG  UGUCAUGUGUCAUGUU UGAUUG   GUCAAUGAA           A
  |||||||||||||| ||||| |||||||  |||||||||||||||| ||||||   |||||||||           U
  AGUGCACAGUAUAA AAUAA CUAUUAC  ACAGUGCACAGUACAA ACUAAU   CAGUUGAGG           U
AC              A     C       UA                G      UUA         UACUUUCUAUC
Stem-loop sequence UCACGUGUCAUGUUCUUAUUAGAUGAUGGCUGUCAUGUGUCAUGUUGUGAUUGGUCAAUGAAAACAACAAUUCAUUCUAUCUUUCAUGGAGUUGACAUUUAAUCAGAACAUGACACGUGACAAUCAUUAUCCAAUAAAAAUAUGACACGUGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK245140.1
ncRNA:20   UUAUUCUUGUACUGUGCACU   1
  |||*||||||||||||||||
targets:1580   AAUCAGAACAUGACACGUGA   1599

1.0 Glycine max cDNA, clone: GMFL01-21-P01 NA coding protein psRNATarget
XM_006602607.2
ncRNA:20   UUAUUCUUGUACUGUGCACU   1
  |||*||||||||||||*|||
targets:638   AAUCAGAACAUGACACAUGA   657

2.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget