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BaseInfo

ncRNA ID novel_gma_miR3124
Species Glycine max
Class miRNA
Genome position Chr10:34658747-34658843 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 1 - AAGAGUGUGUUUGGAUAGAG - 20
Stem-loop(if miRNA) --     UGU   UG              -          --AU      U
  AAGAG   GUU  GAUAGAGAAUUUUA AUUGAGGAAA    AAUUUA C
  |||||   |||  |||||||||||||| ||||||||||    ||||||
  UUUUU   UAG  UUGUUUUUUAAAAU UAAUUUCUUU    UUAAGU A
UA     --U   GU              C          AAAU      A
Stem-loop sequence AAGAGUGUGUUUGGAUAGAGAAUUUUAAUUGAGGAAAAUAAUUUAUCAAUGAAUUUAAAUUUCUUUAAUCUAAAAUUUUUUGUUUGGAUUUUUUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767860.1
ncRNA:20   GAGAUAGGUUUGUGUGAGAA   1
  ||||*|||||*|||||||||
targets:199   CUCUCUCCAACCACACUCUU   218

2.5 PREDICTED: Glycine max F-box protein At3g07870-like (LOC106796262), mRNA F-box protein At3g07870-like(LOC106796262) coding protein psRNATarget