ncRNA ID | novel_gma_miR3120 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:15970041-15970110 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUAGACGGUCUUGUUUGAACC - 21 |
Stem-loop(if miRNA) |
-----------UUAGA   U      UG  CCG      C                 CGG CUUGUU  AA   AGAUGA U                 ||| ||||||  ||   |||||| U                 GUU GAACAG  UU   UUUAUU U AGAAGAUGUAGUAUAA   U      GU  --A      A |
Stem-loop sequence | UUAGACGGUCUUGUUUGAACCGAGAUGACUUUAUUAUUUAUUUGGACAAGUUUGAAUAUGAUGUAGAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006592765.2 |
|
2.5 | PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 (LOC100807714), transcript variant X1, mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230(LOC100807714) | coding protein | psRNATarget |