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BaseInfo

ncRNA ID novel_gma_miR3120
Species Glycine max
Class miRNA
Genome position Chr17:15970041-15970110 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 21
Mature sequence(if miRNA) 1 - UUAGACGGUCUUGUUUGAACC - 21
Stem-loop(if miRNA) -----------UUAGA   U      UG  CCG      C
                CGG CUUGUU  AA   AGAUGA U
                ||| ||||||  ||   |||||| U
                GUU GAACAG  UU   UUUAUU U
AGAAGAUGUAGUAUAA   U      GU  --A      A
Stem-loop sequence UUAGACGGUCUUGUUUGAACCGAGAUGACUUUAUUAUUUAUUUGGACAAGUUUGAAUAUGAUGUAGAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006592765.2
ncRNA:21   CCAAGUUUGUUCUGGCAGAUU   1
  **|||||||||*||||||||*
targets:942   UUUUCAAACAAAACCGUCUAU   962

2.5 PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 (LOC100807714), transcript variant X1, mRNA G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230(LOC100807714) coding protein psRNATarget