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BaseInfo

ncRNA ID novel_gma_miR3111
Species Glycine max
Class miRNA
Genome position Chr16:31052025-31052113 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670;SRR1451674
Length 20
Mature sequence(if miRNA) 1 - UUGUAGGCUCUUUCUUUCUU - 20
Stem-loop(if miRNA) --UU   G  U           AAUCAA    GA    AUAG   UG
    GUA GC CUUUCUUUCUU      CCUG  UACU    UUG  U
    ||| || |||||||||||      ||||  ||||    |||
    UAU UG GAGAGAGAGGA      GGAC  GUGA    AAU  U
AGUC   G  U           ----GG    -A    GAUA   UA
Stem-loop sequence UUGUAGGCUCUUUCUUUCUUAAUCAACCUGGAUACUAUAGUUGUGUUAUUAAAUAGAGUGACAGGGGAGGAGAGAGAGUGUGUAUCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003529399.3
ncRNA:20   UUCUUUCUUUCUCGGAUGUU   1
  =|||=||||||||*||||||
targets:726   GAGAGAGAAAGAGACUACAA   745

2.5 PREDICTED: Glycine max DNA-damage-repair/toleration protein DRT111, chloroplastic-like (LOC100805487), mRNA DNA-damage-repair/toleration protein DRT111, chloroplastic-like(LOC100805487) coding protein psRNATarget