ncRNA ID | novel_gma_miR3111 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:31052025-31052113 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670;SRR1451674 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUGUAGGCUCUUUCUUUCUU - 20 |
Stem-loop(if miRNA) |
--UU   G  U           AAUCAA    GA    AUAG   UG     GUA GC CUUUCUUUCUU      CCUG  UACU    UUG  U     ||| || |||||||||||      ||||  ||||    |||     UAU UG GAGAGAGAGGA      GGAC  GUGA    AAU  U AGUC   G  U           ----GG    -A    GAUA   UA |
Stem-loop sequence | UUGUAGGCUCUUUCUUUCUUAAUCAACCUGGAUACUAUAGUUGUGUUAUUAAAUAGAGUGACAGGGGAGGAGAGAGAGUGUGUAUCUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003529399.3 |
|
2.5 | PREDICTED: Glycine max DNA-damage-repair/toleration protein DRT111, chloroplastic-like (LOC100805487), mRNA | DNA-damage-repair/toleration protein DRT111, chloroplastic-like(LOC100805487) | coding protein | psRNATarget |