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BaseInfo

ncRNA ID novel_gma_miR3110
Species Glycine max
Class miRNA
Genome position Chr16:25965370-25965411 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 23 - GGUAGGUUGCGACAAUAGGU - 42
Stem-loop(if miRNA) ---CUUUU     C   U   G
        UCGCA CCU GCC A
        ||||| ||| |||
        AGCGU GGA UGG A
UGGAUAAC     U   -   G
Stem-loop sequence CUUUUUCGCACCCUUGCCGAAGGGUAGGUUGCGACAAUAGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006604953.2
ncRNA:20   UGGAUAACAGCGUUGGAUGG   1
  =*||||||||||||||||||
targets:521   GGCUAUUGUCGCAACCUACC   540

1.0 PREDICTED: Glycine max putative exosome complex component rrp40 (LOC100778661), mRNA putative exosome complex component rrp40(LOC100778661) coding protein psRNATarget
XM_006606762.2
ncRNA:20   UGGAUAACAGCGUUGGAUGG   1
  ||=*|*||||||||||||||
targets:325   ACUCAGUGUCGCAACCUACC   344

3.0 PREDICTED: Glycine max uncharacterized LOC100807920 (LOC100807920), mRNA uncharacterized LOC100807920(LOC100807920) coding protein psRNATarget