Search result

BaseInfo

ncRNA ID novel_gma_miR3108
Species Glycine max
Class miRNA
Genome position Chr15:8002794-8002884 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 1 - UAUAUUACAUCCUAAUUUUA - 20
Stem-loop(if miRNA) ---AC    C    C        ACC    -U     AUUC   AAA
     UUGG GUGU GUGUAGUU   UACU  CCCAU    ACC   A
     |||| |||| ||||||||   ||||  |||||    |||
     AAUC UACA UAUAUUAG   AUGG  GGGUG    UGG   A
AUUUU    C    U        AAA    UU     -GAU   GAA
Stem-loop sequence ACUUGGCGUGUCGUGUAGUUACCUACUUCCCAUAUUCACCAAAAAAAGGGUUAGGUGGGUUGGUAAAAGAUUAUAUUACAUCCUAAUUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003517498.3
ncRNA:20   AUUUUAAUCCUACAUUAUAU   1
  *||=||||*|||||||||||
targets:1100   CAAGAUUAUGAUGUAAUAUA   1119

2.5 PREDICTED: Glycine max uncharacterized LOC100791546 (LOC100791546), mRNA uncharacterized LOC100791546(LOC100791546) coding protein psRNATarget
XM_003533641.3
ncRNA:20   AUUUUAAUCCUACAUUAUAU   1
  |||||*|*||||||||||||
targets:2398   UAAAAGUUGGAUGUAAUAUA   2417

2.5 PREDICTED: Glycine max sacsin-like (LOC100789980), mRNA sacsin-like(LOC100789980) coding protein psRNATarget