ncRNA ID | novel_gma_miR3108 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:8002794-8002884 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UAUAUUACAUCCUAAUUUUA - 20 |
Stem-loop(if miRNA) |
---AC    C    C        ACC    -U     AUUC   AAA      UUGG GUGU GUGUAGUU   UACU  CCCAU    ACC   A      |||| |||| ||||||||   ||||  |||||    |||      AAUC UACA UAUAUUAG   AUGG  GGGUG    UGG   A AUUUU    C    U        AAA    UU     -GAU   GAA |
Stem-loop sequence | ACUUGGCGUGUCGUGUAGUUACCUACUUCCCAUAUUCACCAAAAAAAGGGUUAGGUGGGUUGGUAAAAGAUUAUAUUACAUCCUAAUUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003517498.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100791546 (LOC100791546), mRNA | uncharacterized LOC100791546(LOC100791546) | coding protein | psRNATarget | |||||||||
XM_003533641.3 |
|
2.5 | PREDICTED: Glycine max sacsin-like (LOC100789980), mRNA | sacsin-like(LOC100789980) | coding protein | psRNATarget |