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BaseInfo

ncRNA ID	novel_gma_miR3104
Species	Glycine max
Class	miRNA
Genome position	Chr15:15433226-15433450 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	21
Mature sequence(if miRNA)	1 - AAUUAUAGGGACUAAAAAGAC - 21
Stem-loop(if miRNA)	--G                    C    U      ------C  UC        U       A     U     UC        ----UA        GUUU           A     U    UUUUUAGUUCCUAUAAUUUA AUUU AAUUCU       UU  UGUAGUUU AAAAGUG UCUUU UAGUU  UAUAGUUU      UGAUUUUU    UUUUAGUCCUU UAAUU U    |||||||||||||||||||| |||| ||||||       ||  |||||||| ||||||| ||||| |||||  ||||||||      ||||||||    ||||||||||| |||||    AAAAAUCAGGGAUAUUAAAU UAAA UUAAGA       AG  ACAUUAAA UUUUUAC AGAAA AUCAG  AUAUUAAA      ACUAAGAG    AAAAUCAGGAA AUUAA U CAG                    A    C      AAAAAUC  GA        -       A     U     GA        UGUAAA        ----           A     A
Stem-loop sequence	GUUUUUAGUUCCUAUAAUUUACAUUUUAAUUCUCUUUCUGUAGUUUUAAAAGUGAUCUUUUUAGUUUCUAUAGUUUUAUGAUUUUUGUUUUUUUAGUCCUUAUAAUUUUUAAAUUAAAAGGACUAAAAGAGAAUCAAAAUGUAAAUUAUAAGGACUAUAAAGAACAUUUUUAAAUUACAAGGACUAAAAAAGAAUUCAAAUAUAAAUUAUAGGGACUAAAAAGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006577048.2	ncRNA:21   CAGAAAAAUCAGGGAUAUUAA   1   ||||||||||||||||||=|| targets:1919   GUCUUUUUAGUCCCUAUAGUU   1939 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_006577048.2	ncRNA:21   CAGAAAAAUCAGGGAUAUUAA   1   **||||||||||||||||*|| targets:1890   ACCUUUUUAGUCCCUAUAUUU   1910 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_014773932.1	ncRNA:21   CAGAAAAAUCAGGGAUAUUAA   1   ||||||||||||||||||=|| targets:2029   GUCUUUUUAGUCCCUAUAGUU   2049 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_014773932.1	ncRNA:21   CAGAAAAAUCAGGGAUAUUAA   1   **||||||||||||||||*|| targets:2000   ACCUUUUUAGUCCCUAUAUUU   2020 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget