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BaseInfo

ncRNA ID novel_gma_miR3102
Species Glycine max
Class miRNA
Genome position Chr15:21833458-21833530 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670;SRR1451674
Length 20
Mature sequence(if miRNA) 54 - UGAUUAUGAAUUCUGCACAA - 73
Stem-loop(if miRNA) --    U        -  C  AAA     A       U
  UGAU AUGAAUUC UG AC   ACAAG AACUUGC U
  |||| |||||||| || ||   ||||| |||||||
  AUUA UAUUUAAG AC UG   UGUUU UUGGAUG U
AU    U        U  A  --G     G       U
Stem-loop sequence UGAUUAUGAAUUCUGCACAAAACAAGAAACUUGCUUUUGUAGGUUGUUUGUGGUACAUGAAUUUAUUAUUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014778955.1
ncRNA:20   AACACGUCUUAAGUAUUAGU   1
  ***|*|||||||||||||||
targets:96   CAUUUCAGAAUUCAUAAUCA   115

3.0 PREDICTED: Glycine max shikimate kinase 1, chloroplastic-like (LOC100784290), mRNA shikimate kinase 1, chloroplastic-like(LOC100784290) coding protein psRNATarget