Search result

BaseInfo

ncRNA ID	novel_gma_miR3101
Species	Glycine max
Class	miRNA
Genome position	Chr10:25533839-25533895 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	21
Mature sequence(if miRNA)	1 - UCAUUCUAUAUAUAUAUAUAU - 21
Stem-loop(if miRNA)	--               --   AAAAACA   AUAUAUAUAUAUAGA  GAG       G   |||||||||||||||  |||       C   UAUAUAUAUAUAUCU  CUC       U UA               UA   CAGACCC
Stem-loop sequence	AUAUAUAUAUAUAGAGAGAAAAACAGCUCCCAGACCUCAUUCUAUAUAUAUAUAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014774868.1	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||* targets:4927   AUAUAUAUAUAUAUAUAAUGU   4947 Target Full Sequence	2.5	PREDICTED: Glycine max ABC transporter G family member 5-like (LOC100818395), mRNA	ABC transporter G family member 5-like(LOC100818395)	coding protein	psRNATarget
XM_014767498.1	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   ||||||||||||||||=|||* targets:342   AUAUAUAUAUAUAUAGGAUGC   362 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659579 (LOC102659579), mRNA	uncharacterized LOC102659579(LOC102659579)	coding protein	psRNATarget
XM_003544179.3	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||||||** targets:1827   AUAUAUAUAUAUAUAGAAUCC   1847 Target Full Sequence	2.5	PREDICTED: Glycine max RING-H2 finger protein ATL11-like (LOC100815982), mRNA	RING-H2 finger protein ATL11-like(LOC100815982)	coding protein	psRNATarget
XM_006591380.2	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||= targets:522   AUAUAUAUAUAUAUAUAAUGG   542 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100787382 (LOC100787382), mRNA	uncharacterized LOC100787382(LOC100787382)	coding protein	psRNATarget
XM_006594431.2	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||= targets:234   AUAUAUAUAUAUAUAUAAUGG   254 Target Full Sequence	2.5	PREDICTED: Glycine max monothiol glutaredoxin-S2-like (LOC100784603), mRNA	monothiol glutaredoxin-S2-like(LOC100784603)	coding protein	psRNATarget
XM_014776791.1	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||= targets:325   AUAUAUAUAUAUAUAUAAUGG   345 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106798975 (LOC106798975), mRNA	uncharacterized LOC106798975(LOC106798975)	coding protein	psRNATarget
XM_006582224.2	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||= targets:18   AUAUAUAUAUAUAUAUAAUGG   38 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102670423 (LOC102670423), mRNA	uncharacterized LOC102670423(LOC102670423)	coding protein	psRNATarget
XM_006594466.2	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||= targets:18   AUAUAUAUAUAUAUAUAAUGG   38 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102664775 (LOC102664775), mRNA	uncharacterized LOC102664775(LOC102664775)	coding protein	psRNATarget
XM_003522789.3	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||* targets:2741   AUAUAUAUAUAUAUAUAAUGC   2761 Target Full Sequence	2.5	PREDICTED: Glycine max probable WRKY transcription factor 2 (LOC100796545), transcript variant X1, mRNA	probable WRKY transcription factor 2(LOC100796545)	coding protein	psRNATarget
XM_014774626.1	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||* targets:2736   AUAUAUAUAUAUAUAUAAUGC   2756 Target Full Sequence	2.5	PREDICTED: Glycine max probable WRKY transcription factor 2 (LOC100796545), transcript variant X3, mRNA	probable WRKY transcription factor 2(LOC100796545)	coding protein	psRNATarget
XM_006578291.2	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||* targets:2579   AUAUAUAUAUAUAUAUAAUGC   2599 Target Full Sequence	2.5	PREDICTED: Glycine max probable WRKY transcription factor 2 (LOC100796545), transcript variant X2, mRNA	probable WRKY transcription factor 2(LOC100796545)	coding protein	psRNATarget
XM_014774627.1	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||* targets:2574   AUAUAUAUAUAUAUAUAAUGC   2594 Target Full Sequence	2.5	PREDICTED: Glycine max probable WRKY transcription factor 2 (LOC100796545), transcript variant X4, mRNA	probable WRKY transcription factor 2(LOC100796545)	coding protein	psRNATarget
XM_003519979.3	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||* targets:76   AUAUAUAUAUAUAUAUAAUGC   96 Target Full Sequence	2.5	PREDICTED: Glycine max probable sulfate transporter 4.2 (LOC100794754), mRNA	probable sulfate transporter 4.2(LOC100794754)	coding protein	psRNATarget
XM_003526146.3	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||* targets:1888   AUAUAUAUAUAUAUAUAAUGU   1908 Target Full Sequence	2.5	PREDICTED: Glycine max polyphenol oxidase, chloroplastic-like (LOC100792012), mRNA	polyphenol oxidase, chloroplastic-like(LOC100792012)	coding protein	psRNATarget
XM_006573495.2	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   ||||||||||||||||*|||* targets:1499   AUAUAUAUAUAUAUAGCAUGC   1519 Target Full Sequence	2.5	PREDICTED: Glycine max auxin-responsive protein SAUR24-like (LOC100776099), mRNA	auxin-responsive protein SAUR24-like(LOC100776099)	coding protein	psRNATarget
AF370735.1	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   ||||||||||||||||*|||* targets:221   AUAUAUAUAUAUAUAGCAUGU   241 Target Full Sequence	2.5	Glycine max clone 39 CBF-like protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_003525766.3	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   ||||||||||||||||*|||* targets:547   AUAUAUAUAUAUAUAGCAUGU   567 Target Full Sequence	2.5	PREDICTED: Glycine max pEARLI1-like lipid transfer protein 1 (LOC100804198), mRNA	pEARLI1-like lipid transfer protein 1(LOC100804198)	coding protein	psRNATarget
XM_006575041.2	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   |||||||||||||||*||||* targets:486   AUAUAUAUAUAUAUACAAUGU   506 Target Full Sequence	2.5	PREDICTED: Glycine max glutaredoxin-C11-like (LOC100810325), mRNA	glutaredoxin-C11-like(LOC100810325)	coding protein	psRNATarget
XM_003544736.3	ncRNA:21   UAUAUAUAUAUAUAUCUUACU   1   =||||||||||||||*||||* targets:29   GUAUAUAUAUAUAUAUAAUGU   49 Target Full Sequence	2.5	PREDICTED: Glycine max transport and Golgi organization 2 homolog (LOC100781226), mRNA	transport and Golgi organization 2 homolog(LOC100781226)	coding protein	psRNATarget
XM_003533409.3	ncRNA:21   UAUAUAUAUAUAUAUCUUA-CU   1   |||||||||||||||||||-|| targets:17   AUAUAUAUAUAUAUAGAAUAGA   38 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized protein At4g15970-like (LOC100775921), transcript variant X1, mRNA	uncharacterized protein At4g15970-like(LOC100775921)	coding protein	psRNATarget