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BaseInfo

ncRNA ID novel_gma_miR3096
Species Glycine max
Class miRNA
Genome position Chr10:28136777-28136984 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 189 - UACUAUGAUCAAAAUCCUAA - 208
Stem-loop(if miRNA) --    A    C     CC   AU  A     A        ACUAAUC        C     CUA  CAC        C          ---   A        A
  UACU UGAU AAAAU  UAA  AU UUAAA AUGACUUC       UUGAAGAU AAAUU   CA   UAAAUUAA AUGGAGAUGU   ACU GCAUGUAG A
  |||| |||| |||||  |||  || ||||| ||||||||       |||||||| |||||   ||   |||||||| ||||||||||   ||| |||||||| G
  AUGA AUUA UUUUA  AUU  UA AAUUU UACUGAAG       AGCUUCUG UUUAA   GU   AUUUAAUU UACCUCUACA   UGA CGUAUAUC U
AU    C    U     AU   CU  C     C        CAACUCC        A     AAC  ACC        U          GAA   A        U
Stem-loop sequence UACUAUGAUCAAAAUCCUAAAUAUAUUAAAAAUGACUUCACUAAUCUUGAAGAUCAAAUUCUACACACUAAAUUAACAUGGAGAUGUACUAGCAUGUAGAAGUUCUAUAUGCAAGUAAGACAUCUCCAUUUUAAUUUACCAUGCAAAAUUUAGUCUUCGACCUCAACGAAGUCAUCUUUAACAUUCUUAUAAUUUUUAUUACAGUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT093804.1
ncRNA:20   AAUCCUAAAACUAGUAUCAU   1
  ||||||||||||||||||||
targets:69   UUAGGAUUUUGAUCAUAGUA   88

0.0 Soybean clone JCVI-FLGm-24M14 unknown mRNA NA coding protein psRNATarget