ncRNA ID | novel_gma_miR3095 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:32209508-32209675 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 20 |
Mature sequence(if miRNA) | 149 - UGCGGGAAAAGAGUGAAUCC - 168 |
Stem-loop(if miRNA) |
--AG         - A      C         GU U     U              AAUUGAACUGCU   A  -UCGA      UUU  AA     UCACUUUUU C CGCAUU AUGUAUUCA  G AUUUG AACUGUUGGAUGAA            GAU UC     AUAAGU   UC  A     ||||||||| | |||||| |||||||||  | ||||| ||||||||||||||            ||| ||     ||||||   ||     AGUGAGAAA G GCGUAA UACGUAAGU  U UGAAC UUGACAACCUACUU            CUA AG     UAUUCG   AG  U CCUA         A G      A         UG -     C              ------------   C  UAAAA      -UC  AU |
Stem-loop sequence | AGUCACUUUUUCACGCAUUCAUGUAUUCAGUGUAUUUGUAACUGUUGGAUGAAAAUUGAACUGCUGAUAUCUCGAAUAAGUUUUUCAAAUUAGACUGCUUAUAAAAUGACAUCUUCAUCCAACAGUUCCAAGUUGUUGAAUGCAUAAAUGCGGGAAAAGAGUGAAUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003531623.3 |
|
3.0 | PREDICTED: Glycine max malonate--CoA ligase-like (LOC100810130), transcript variant X1, mRNA | malonate--CoA ligase-like(LOC100810130) | coding protein | psRNATarget |