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BaseInfo

ncRNA ID novel_gma_miR3095
Species Glycine max
Class miRNA
Genome position Chr15:32209508-32209675 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 149 - UGCGGGAAAAGAGUGAAUCC - 168
Stem-loop(if miRNA) --AG         - A      C         GU U     U              AAUUGAACUGCU   A  -UCGA      UUU  AA
    UCACUUUUU C CGCAUU AUGUAUUCA  G AUUUG AACUGUUGGAUGAA            GAU UC     AUAAGU   UC  A
    ||||||||| | |||||| |||||||||  | ||||| ||||||||||||||            ||| ||     ||||||   ||
    AGUGAGAAA G GCGUAA UACGUAAGU  U UGAAC UUGACAACCUACUU            CUA AG     UAUUCG   AG  U
CCUA         A G      A         UG -     C              ------------   C  UAAAA      -UC  AU
Stem-loop sequence AGUCACUUUUUCACGCAUUCAUGUAUUCAGUGUAUUUGUAACUGUUGGAUGAAAAUUGAACUGCUGAUAUCUCGAAUAAGUUUUUCAAAUUAGACUGCUUAUAAAAUGACAUCUUCAUCCAACAGUUCCAAGUUGUUGAAUGCAUAAAUGCGGGAAAAGAGUGAAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003531623.3
ncRNA:20   CCUAAGUGAGAAAAGGGCGU   1
  ***|||*|||||||||||||
targets:501   UCCUUCCCUCUUUUCCCGCA   520

3.0 PREDICTED: Glycine max malonate--CoA ligase-like (LOC100810130), transcript variant X1, mRNA malonate--CoA ligase-like(LOC100810130) coding protein psRNATarget