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BaseInfo

ncRNA ID novel_gma_miR3094
Species Glycine max
Class miRNA
Genome position Chr15:16529799-16529861 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670;SRR1451672;SRR1451674;SRR1451676
Length 20
Mature sequence(if miRNA) 44 - UGUGUUUGUGAUUGGAUUGG - 63
Stem-loop(if miRNA) --    UG     UAU       --G  U   
  AGUU  AUUAU   UGCAGUG   UU GAUU
  ||||  |||||   |||||||   || |||U
  UUAG  UAGUG   GUGUUAU   AG CUAG
GG    GU     UUU       AAA  U   
Stem-loop sequence AGUUUGAUUAUUAUUGCAGUGGUUUGAUUUGAUCUGAAAAUAUUGUGUUUGUGAUUGGAUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003534663.3
ncRNA:20   GGUUAGGUUAGUGUUUGUGU   1
  *||||=|||||||||||||*
targets:43   ACAAUUCAAUCACAAACACC   62

2.0 PREDICTED: Glycine max probable F-box protein At4g22030 (LOC100801646), mRNA probable F-box protein At4g22030(LOC100801646) coding protein psRNATarget
XM_003556033.3
ncRNA:20   GGUUAGGUUAGUGUUUGUGU   1
  |==*||||||||||||||||
targets:45   CUGCUCCAAUCACAAACACA   64

3.0 PREDICTED: Glycine max phosphoglucomutase, chloroplastic (LOC100778321), transcript variant X1, mRNA phosphoglucomutase, chloroplastic(LOC100778321) coding protein psRNATarget