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BaseInfo

ncRNA ID	novel_gma_miR3092
Species	Glycine max
Class	miRNA
Genome position	Chr15:15548825-15549035 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	20
Mature sequence(if miRNA)	192 - AAAAGAUAAAGGAUUAUUUU - 211
Stem-loop(if miRNA)	--                  UAA      -       -AC    UA       U     A        -AA  G            AAAU     U  ---A    A     A   AAUGGUCCUUUAUCUUUU   AUGAUU CACUUUG   CCUU  UCUUAUU AAAAU UUUAAGAU   CC UUCAAUUAUUUA    GAUCU UU    UUUG GUGUU U   ||||||||||||||||||   |||||| |||||||   ||||  ||||||| ||||| ||||||||   || ||||||||||||    ||||| ||    |||| ||||| U   UUAUUAGGAAAUAGAAAA   UGCUGA GUGAAAC   GGAA  AGAAUAA UUUUA AAGUUUUA   GG AAGUUAAUAAAU    UUAGA AA    AAAC CAUAA C UU                  --C      A       CAU    -C       -     C        CUA  -            ----     U  GUUG    -     A
Stem-loop sequence	AAUGGUCCUUUAUCUUUUUAAAUGAUUCACUUUGACCCUUUAUCUUAUUUAAAAUAUUUAAGAUAACCGUUCAAUUAUUUAAAAUGAUCUUUUAUUUGAGUGUUAUUCAAAUACCAAAGUUGAAUAGAUUUAAAUAAUUGAAGGAUCAUUUUGAACAUUUUAAUAAGACAAGGUACCAAAGUGAAGUCGUCAAAAGAUAAAGGAUUAUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003548935.3	ncRNA:20   UUUUAUUAGGAAAUAGAAAA   1   ||||||=||||||||=|||| targets:2081   AAAAUAGUCCUUUAUUUUUU   2100 Target Full Sequence	2.5	PREDICTED: Glycine max trihelix transcription factor GT-2-like (LOC100776819), mRNA	trihelix transcription factor GT-2-like(LOC100776819)	coding protein	psRNATarget
XM_003520785.3	ncRNA:20   UUUUAUUAGGAAAUAGAAAA   1   ||||||*||||||*|||||| targets:1441   AAAAUAUUCCUUUUUCUUUU   1460 Target Full Sequence	2.5	PREDICTED: Glycine max benzyl alcohol O-benzoyltransferase-like (LOC100793362), mRNA	benzyl alcohol O-benzoyltransferase-like(LOC100793362)	coding protein	psRNATarget
XM_014768078.1	ncRNA:20   UUUUAUUAGGAAAUAGAAAA   1   |*||||||||*||||||||| targets:1844   ACAAUAAUCCAUUAUCUUUU   1863 Target Full Sequence	2.5	PREDICTED: Glycine max protein RMD5 homolog A-like (LOC100782483), transcript variant X3, mRNA	protein RMD5 homolog A-like(LOC100782483)	coding protein	psRNATarget
XM_003517277.3	ncRNA:20   UUUUAUUAGGAAAUAGAAAA   1   =||||*|||*|||||||||| targets:3672   GAAAUUAUCAUUUAUCUUUU   3691 Target Full Sequence	2.5	PREDICTED: Glycine max suppressor of RPS4-RLD 1-like (LOC100808879), mRNA	suppressor of RPS4-RLD 1-like(LOC100808879)	coding protein	psRNATarget