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BaseInfo

ncRNA ID novel_gma_miR3091
Species Glycine max
Class miRNA
Genome position Chr14:13086823-13086864 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 1 - AAUUACUAUUAUUAUUUUAA - 20
Stem-loop(if miRNA) -----A    C          U
      AUUA UAUUAUUAUU U
      |||| |||||||||| A
      UAAU AUAAUAAUAA A
UAAUAA    A          U
Stem-loop sequence AAUUACUAUUAUUAUUUUAAUAAUAAUAAUAAUAAUAAUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014765449.1
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  *|||||||||||||*|||||
targets:63   AUAAAAUAAUAAUAAUAAUU   82

1.5 PREDICTED: Glycine max 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like (LOC100811146), transcript variant X4, mRNA 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like(LOC100811146) coding protein psRNATarget
XM_006593908.2
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  *|||||||||||||*|||||
targets:63   AUAAAAUAAUAAUAAUAAUU   82

1.5 PREDICTED: Glycine max 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like (LOC100811146), transcript variant X3, mRNA 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like(LOC100811146) coding protein psRNATarget
XM_006593906.2
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  *|||||||||||||*|||||
targets:63   AUAAAAUAAUAAUAAUAAUU   82

1.5 PREDICTED: Glycine max 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like (LOC100811146), transcript variant X1, mRNA 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like(LOC100811146) coding protein psRNATarget
XM_006593907.2
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  *|||||||||||||*|||||
targets:63   AUAAAAUAAUAAUAAUAAUU   82

1.5 PREDICTED: Glycine max 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like (LOC100811146), transcript variant X2, mRNA 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like(LOC100811146) coding protein psRNATarget
XM_003551583.3
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-||||||||||||||||
targets:1042   AUAAUAAUAAUAAUAGUAAUU   1062

2.0 PREDICTED: Glycine max protein SCARECROW-like (LOC100806779), mRNA protein SCARECROW-like(LOC100806779) coding protein psRNATarget
XM_003517974.3
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  ||||||||||||||*||||*
targets:1093   UUAAAAUAAUAAUAAUAAUA   1112

2.5 PREDICTED: Glycine max myb-related protein Myb4-like (LOC100794205), mRNA myb-related protein Myb4-like(LOC100794205) coding protein psRNATarget
XM_003518541.3
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  ||||||||||||||*||||*
targets:680   UUAAAAUAAUAAUAAUAAUA   699

2.5 PREDICTED: Glycine max zinc finger protein ZAT3-like (LOC100792631), mRNA zinc finger protein ZAT3-like(LOC100792631) coding protein psRNATarget
XM_006593498.2
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  ||||||||||||||*||||*
targets:164   UUAAAAUAAUAAUAAUAAUA   183

2.5 PREDICTED: Glycine max RNA-binding protein 38 (LOC100787086), mRNA RNA-binding protein 38(LOC100787086) coding protein psRNATarget
XM_003516989.3
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  |||*||||||||||*|||||
targets:933   UUAUAAUAAUAAUAAUAAUU   952

2.5 PREDICTED: Glycine max uncharacterized LOC100788211 (LOC100788211), mRNA uncharacterized LOC100788211(LOC100788211) coding protein psRNATarget
XM_014774594.1
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  ||||||*|||||||||||*|
targets:387   UUAAAAAAAUAAUAGUAAGU   406

2.5 PREDICTED: Glycine max early endosome antigen 1-like (LOC102663421), transcript variant X2, mRNA early endosome antigen 1-like(LOC102663421) coding protein psRNATarget
XM_003524158.3
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  **||||||||||||*|||||
targets:2010   CCAAAAUAAUAAUAAUAAUU   2029

2.5 PREDICTED: Glycine max two-component response regulator ORR24-like (LOC100808625), mRNA two-component response regulator ORR24-like(LOC100808625) coding protein psRNATarget
XM_003518166.3
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  ||||-|||||||||||||||*
targets:808   UUAACAAUAAUAAUAGUAAUA   828

3.0 PREDICTED: Glycine max GATA transcription factor 2-like (LOC100783976), transcript variant X2, mRNA GATA transcription factor 2-like(LOC100783976) coding protein psRNATarget
XM_006574688.2
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  ||||-|||||||||||||||*
targets:812   UUAACAAUAAUAAUAGUAAUA   832

3.0 PREDICTED: Glycine max GATA transcription factor 2-like (LOC100783976), transcript variant X1, mRNA GATA transcription factor 2-like(LOC100783976) coding protein psRNATarget
XM_003541785.3
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-=|||||||||||||||
targets:1273   AUAAUGAUAAUAAUAGUAAUU   1293

3.0 PREDICTED: Glycine max uncharacterized LOC100803315 (LOC100803315), mRNA uncharacterized LOC100803315(LOC100803315) coding protein psRNATarget
NM_001250083.2
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-=|||||||||||||||
targets:1332   AUAAUGAUAAUAAUAGUAAUU   1352

3.0 Glycine max uncharacterized LOC100527250 (LOC100527250), mRNA uncharacterized LOC100527250(LOC100527250) coding protein psRNATarget
XM_014765883.1
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  *|==|||||||||||||||*
targets:979   GUGGAAUAAUAAUAGUAAUA   998

3.0 PREDICTED: Glycine max transcription factor TCP4-like (LOC100796938), mRNA transcription factor TCP4-like(LOC100796938) coding protein psRNATarget
BT098166.1
ncRNA:20   AAUUUU-AUUAUUAUCAUUAA   1
  *|||||-|||||||||||||*
targets:32   AUAAAACUAAUAAUAGUAAUA   52

3.0 Soybean clone JCVI-FLGm-12I19 unknown mRNA NA coding protein psRNATarget
XM_003536673.3
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:75   AUAAUAAUAAUAAUAGUAAUA   95

3.0 PREDICTED: Glycine max protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like (LOC100790896), mRNA protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like(LOC100790896) coding protein psRNATarget
XM_014771263.1
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:1476   AUAAUAAUAAUAAUAGUAAUA   1496

3.0 PREDICTED: Glycine max uncharacterized LOC100816910 (LOC100816910), mRNA uncharacterized LOC100816910(LOC100816910) coding protein psRNATarget
XM_003523582.3
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:435   AUAAUAAUAAUAAUAGUAAUG   455

3.0 PREDICTED: Glycine max RNA-binding protein 1-like (LOC100786665), mRNA RNA-binding protein 1-like(LOC100786665) coding protein psRNATarget
XM_003531810.3
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:417   AUAAUAAUAAUAAUAGUAAUA   437

3.0 PREDICTED: Glycine max ninja-family protein AFP3-like (LOC100820446), mRNA ninja-family protein AFP3-like(LOC100820446) coding protein psRNATarget
XM_006574626.2
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:1066   GUAACAAUAAUAAUAGUAAUA   1086

3.0 PREDICTED: Glycine max 3-epi-6-deoxocathasterone 23-monooxygenase-like (LOC100812489), transcript variant X2, mRNA 3-epi-6-deoxocathasterone 23-monooxygenase-like(LOC100812489) coding protein psRNATarget
XM_003520227.3
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:1214   GUAACAAUAAUAAUAGUAAUA   1234

3.0 PREDICTED: Glycine max 3-epi-6-deoxocathasterone 23-monooxygenase-like (LOC100812489), transcript variant X1, mRNA 3-epi-6-deoxocathasterone 23-monooxygenase-like(LOC100812489) coding protein psRNATarget
XM_014763428.1
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:2151   AUAAUAAUAAUAAUAGUAAUA   2171

3.0 PREDICTED: Glycine max protein indeterminate-domain 5, chloroplastic-like (LOC100786121), transcript variant X2, mRNA protein indeterminate-domain 5, chloroplastic-like(LOC100786121) coding protein psRNATarget
XM_006604616.2
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:64   AUAAUAAUAAUAAUAGUAAUA   84

3.0 PREDICTED: Glycine max probable glutamate carboxypeptidase 2 (LOC100798131), mRNA probable glutamate carboxypeptidase 2(LOC100798131) coding protein psRNATarget
XM_003536665.3
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:2150   AUAAUAAUAAUAAUAGUAAUA   2170

3.0 PREDICTED: Glycine max protein indeterminate-domain 5, chloroplastic-like (LOC100786121), transcript variant X1, mRNA protein indeterminate-domain 5, chloroplastic-like(LOC100786121) coding protein psRNATarget
XM_006592208.2
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:1360   AUAAUAAUAAUAAUAGUAAUA   1380

3.0 PREDICTED: Glycine max BEL1-like homeodomain protein 8 (LOC100793050), transcript variant X1, mRNA BEL1-like homeodomain protein 8(LOC100793050) coding protein psRNATarget
XM_006592528.2
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:942   AUAAUAAUAAUAAUAGUAAUA   962

3.0 PREDICTED: Glycine max WD repeat-containing protein 44-like (LOC100820217), transcript variant X3, mRNA WD repeat-containing protein 44-like(LOC100820217) coding protein psRNATarget
XM_006592529.2
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:940   AUAAUAAUAAUAAUAGUAAUA   960

3.0 PREDICTED: Glycine max WD repeat-containing protein 44-like (LOC100820217), transcript variant X4, mRNA WD repeat-containing protein 44-like(LOC100820217) coding protein psRNATarget
XM_003540713.3
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:1602   AUAAUAAUAAUAAUAGUAAUA   1622

3.0 PREDICTED: Glycine max BEL1-like homeodomain protein 8 (LOC100793050), transcript variant X2, mRNA BEL1-like homeodomain protein 8(LOC100793050) coding protein psRNATarget
XM_003555162.3
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:1484   AUAAUAAUAAUAAUAGUAAUA   1504

3.0 PREDICTED: Glycine max uncharacterized LOC100807897 (LOC100807897), mRNA uncharacterized LOC100807897(LOC100807897) coding protein psRNATarget
XM_006592527.2
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:933   AUAAUAAUAAUAAUAGUAAUA   953

3.0 PREDICTED: Glycine max WD repeat-containing protein 44-like (LOC100820217), transcript variant X2, mRNA WD repeat-containing protein 44-like(LOC100820217) coding protein psRNATarget
XM_006592526.2
ncRNA:20   AAUU-UUAUUAUUAUCAUUAA   1
  *|||-|||||||||||||||*
targets:936   AUAAUAAUAAUAAUAGUAAUA   956

3.0 PREDICTED: Glycine max WD repeat-containing protein 44-like (LOC100820217), transcript variant X1, mRNA WD repeat-containing protein 44-like(LOC100820217) coding protein psRNATarget
XM_003526648.3
ncRNA:20   AAUUUUAUUAUUAUCAUUAA   1
  *|=||=*|||||||||||||
targets:1468   AUGAAGGAAUAAUAGUAAUU   1487

3.0 PREDICTED: Glycine max ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial-like (LOC100814187), mRNA ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial-like(LOC100814187) coding protein psRNATarget
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