ncRNA ID | novel_gma_miR3088 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:10112594-10112739 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUCUAGGUUAUAAUGUCAAAC - 21 |
Stem-loop(if miRNA) |
--A       U    UG    ACAU     A   GUCCC     UU     CCUAUAA   G     -  GG UUGU    UCUAGGU AUAA  UCAA    GGUAG UAU     CAAUA  GAAAU       AAU UUUAU CU  C    A    ||||||| ||||  ||||    ||||| |||     |||||  |||||       ||| ||||| ||  |    A    AGAUCCG UGUU  AGUU    UCAUC AUA     GUUAU  UUUUA       UUG AAGUA GA  G    A UCA       U    CA    GAAU     A   -ACUC     UU     -------   G     U  AA UAUU |
Stem-loop sequence | AUCUAGGUUAUAAUGUCAAACAUGGUAGAUAUGUCCCCAAUAUUGAAAUCCUAUAAAAUGUUUAUCUGGCUUGUAAAUUAUGAAAGUAUGAAGGUUAUUUUUUUAUUGCUCAAUAACUACUUAAGUUGAACUUGUUGCCUAGAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773422.1 |
|
2.0 | PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC100791796), mRNA | lysine-specific demethylase JMJ25-like(LOC100791796) | coding protein | psRNATarget |