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BaseInfo

ncRNA ID	novel_gma_miR3087
Species	Glycine max
Class	miRNA
Genome position	Chr14:7368719-7368940 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	21
Mature sequence(if miRNA)	202 - AAUUAUAGGGACUAAAAAGAC - 222
Stem-loop(if miRNA)	--                                 C        UCUGUA    -A     CU C                   A   UUUA     ---------CU  C     ACU G   CUUUUUAGUCUUUAUAAUUUAUAUUUUAAUUCU UUUUAGUC      GUUU  AAAAU  U UUUUUAGUCCCUAUAGUUU CAU    AUUCU           UC CUGUA   U A   ||||||||||||||||||||||||||||||||| ||||||||      ||||  |||||  | ||||||||||||||||||| |||    |||||           || |||||   |   GAAAAAUCAGGGAUAUUAAAUAUAAAAUUAAGA AAAAUCAG      CAAA  UUUUA  A AAAAAUCAGGGAUAUCAAA GUA    UAAGA           AG GAUAU   A A CA                                 A        ------    AC     CU A                   -   ---C     AUAAAAAAAUC  U     AUU A
Stem-loop sequence	CUUUUUAGUCUUUAUAAUUUAUAUUUUAAUUCUCUUUUAGUCUCUGUAGUUUAAAAAUCUUCUUUUUAGUCCCUAUAGUUUACAUUUUAAUUCUCUUCCCUGUAACUUGAAAAUUAUAUAGUGACUAAAAAAAUAAGAAUCAUGAAACUAUAGGGACUAAAAAAAUCAUUUUCAAAACGACUAAAAAAGAAUUAAAAUAUAAAUUAUAGGGACUAAAAAGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006577048.2	ncRNA:21   CAGAAAAAUCAGGGAUAUUAA   1   ||||||||||||||||||=|| targets:1919   GUCUUUUUAGUCCCUAUAGUU   1939 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_006577048.2	ncRNA:21   CAGAAAAAUCAGGGAUAUUAA   1   **||||||||||||||||*|| targets:1890   ACCUUUUUAGUCCCUAUAUUU   1910 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_014773932.1	ncRNA:21   CAGAAAAAUCAGGGAUAUUAA   1   ||||||||||||||||||=|| targets:2029   GUCUUUUUAGUCCCUAUAGUU   2049 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_014773932.1	ncRNA:21   CAGAAAAAUCAGGGAUAUUAA   1   **||||||||||||||||*|| targets:2000   ACCUUUUUAGUCCCUAUAUUU   2020 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget