ncRNA ID | novel_gma_miR3081 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:29945354-29945462 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 21 |
Mature sequence(if miRNA) | 89 - UGGUUGAUAUUUUGAACGUGC - 109 |
Stem-loop(if miRNA) |
--   CG   C    -A      GAU   -  G   UCUU       -     -C  U   ACG  CAA AAUG  AACCAC   CUC UC AAC    GAGGGGC GUUUC  AC U   |||  ||| ||||  ||||||   ||| || |||    ||||||| |||||  || C   UGC  GUU UUAU  UUGGUG   GAG AG UUG    UUCUUCG CGGAG  UG U CG   AA   -    AG      ---   U  G   UUCU       G     UU  U |
Stem-loop sequence | ACGCGCAACAAUGAAACCACGAUCUCUCGAACUCUUGAGGGGCGUUUCCACUUCUUGUUUGAGGCGGCUUCUUUCUUGUUGGAUGAGGUGGUUGAUAUUUUGAACGUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766883.1 |
|
2.0 | PREDICTED: Glycine max ABC transporter G family member 21-like (LOC100797574), transcript variant X1, mRNA | ABC transporter G family member 21-like(LOC100797574) | coding protein | psRNATarget | |||||||||
XM_003520109.3 |
|
2.0 | PREDICTED: Glycine max ABC transporter G family member 21-like (LOC100797574), transcript variant X2, mRNA | ABC transporter G family member 21-like(LOC100797574) | coding protein | psRNATarget |