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BaseInfo

ncRNA ID novel_gma_miR3081
Species Glycine max
Class miRNA
Genome position Chr10:29945354-29945462 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 21
Mature sequence(if miRNA) 89 - UGGUUGAUAUUUUGAACGUGC - 109
Stem-loop(if miRNA) --   CG   C    -A      GAU   -  G   UCUU       -     -C  U
  ACG  CAA AAUG  AACCAC   CUC UC AAC    GAGGGGC GUUUC  AC U
  |||  ||| ||||  ||||||   ||| || |||    ||||||| |||||  || C
  UGC  GUU UUAU  UUGGUG   GAG AG UUG    UUCUUCG CGGAG  UG U
CG   AA   -    AG      ---   U  G   UUCU       G     UU  U
Stem-loop sequence ACGCGCAACAAUGAAACCACGAUCUCUCGAACUCUUGAGGGGCGUUUCCACUUCUUGUUUGAGGCGGCUUCUUUCUUGUUGGAUGAGGUGGUUGAUAUUUUGAACGUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766883.1
ncRNA:21   CGUGCAAGUUUUAUAGUUGGU   1
  *=||**|||||||||||||||
targets:148   UUACCCUCAAAAUAUCAACCA   168

2.0 PREDICTED: Glycine max ABC transporter G family member 21-like (LOC100797574), transcript variant X1, mRNA ABC transporter G family member 21-like(LOC100797574) coding protein psRNATarget
XM_003520109.3
ncRNA:21   CGUGCAAGUUUUAUAGUUGGU   1
  *=||**|||||||||||||||
targets:145   UUACCCUCAAAAUAUCAACCA   165

2.0 PREDICTED: Glycine max ABC transporter G family member 21-like (LOC100797574), transcript variant X2, mRNA ABC transporter G family member 21-like(LOC100797574) coding protein psRNATarget