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BaseInfo

ncRNA ID	novel_gma_miR3077
Species	Glycine max
Class	miRNA
Genome position	Chr14:34599907-34599994 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	21
Mature sequence(if miRNA)	68 - AGCAACUACAUAAGUGAACUU - 88
Stem-loop(if miRNA)	--    A   C        ACUU   A      UUUAAU  A     U   AGCA CUA AUAAGUGA    GAC UCAUAA      CC AAACC U   |||| ||| ||||||||    ||| ||||||      || |||||   UCGU GGU UAUUCAUU    UUG AGUAUU      GG UUUGG A AC    -   A        -CUU   -      -----U  A     A
Stem-loop sequence	AGCAACUACAUAAGUGAACUUGACAUCAUAAUUUAAUCCAAAACCUUAAGGUUUAGGUUUAUGAGUUUUCUUACUUAUAUGGUGCUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014779004.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:2942   AAGUUCACUUAUGUAGUUUCA   2962 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X12, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_014779003.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:3943   AAGUUCACUUAUGUAGUUUCA   3963 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X11, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_014779002.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:3970   AAGUUCACUUAUGUAGUUUCA   3990 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X10, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_014779000.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:4007   AAGUUCACUUAUGUAGUUUCA   4027 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X8, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_014778998.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:4010   AAGUUCACUUAUGUAGUUUCA   4030 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X6, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_014779001.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:4031   AAGUUCACUUAUGUAGUUUCA   4051 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X9, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_014778997.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:4036   AAGUUCACUUAUGUAGUUUCA   4056 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X5, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_014778996.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:4071   AAGUUCACUUAUGUAGUUUCA   4091 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X4, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_014778999.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:4071   AAGUUCACUUAUGUAGUUUCA   4091 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X7, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_014778995.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:4111   AAGUUCACUUAUGUAGUUUCA   4131 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X3, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_006585304.2	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:4124   AAGUUCACUUAUGUAGUUUCA   4144 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X2, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_006585300.2	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ||||||||||||||||||*|* targets:4164   AAGUUCACUUAUGUAGUUUCA   4184 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 2 (LOC100780527), transcript variant X1, mRNA	callose synthase 2(LOC100780527)	coding protein	psRNATarget
XM_006578690.2	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   =**|||||||||||=|||||| targets:796   GUCUUCACUUAUGUGGUUGCU   816 Target Full Sequence	2.5	PREDICTED: Glycine max protein DYAD (LOC100806484), transcript variant X3, mRNA	protein DYAD(LOC100806484)	coding protein	psRNATarget
XM_006579322.2	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ***||=|=||||||||||||| targets:936   CCCUUUAUUUAUGUAGUUGCU   956 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100527562 (LOC100527562), transcript variant X2, mRNA	uncharacterized LOC100527562(LOC100527562)	coding protein	psRNATarget
XM_006579322.2	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ***||=|=||||||||||||| targets:985   CCCUUUAUUUAUGUAGUUGCU   1005 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100527562 (LOC100527562), transcript variant X2, mRNA	uncharacterized LOC100527562(LOC100527562)	coding protein	psRNATarget
XM_014775308.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ***||=|=||||||||||||| targets:1041   CCCUUUAUUUAUGUAGUUGCU   1061 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100527562 (LOC100527562), transcript variant X1, mRNA	uncharacterized LOC100527562(LOC100527562)	coding protein	psRNATarget
XM_014775308.1	ncRNA:21   UUCAAGUGAAUACAUCAACGA   1   ***||=|=||||||||||||| targets:1090   CCCUUUAUUUAUGUAGUUGCU   1110 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100527562 (LOC100527562), transcript variant X1, mRNA	uncharacterized LOC100527562(LOC100527562)	coding protein	psRNATarget