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BaseInfo

ncRNA ID novel_gma_miR3074
Species Glycine max
Class miRNA
Genome position Chr14:2722734-2722831 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 21
Mature sequence(if miRNA) 1 - ACUGCAUUAUGUGUUUUUUUG - 21
Stem-loop(if miRNA) --A    A     --         -GGU   A  CA   --UG     A  GU
   CUGC UUAUG  UGUUUUUUU    UGC GA  CAG    GUGCU GA  U
   |||| |||||  |||||||||    ||| ||  |||    ||||| ||
   GAUG AAUAU  ACAGAAGGA    GCG CU  GUC    CAUGA CU  C
AAA    -     CA         GGUU   -  CA   CUCA     -  AA
Stem-loop sequence ACUGCAUUAUGUGUUUUUUUGGUUGCAGACACAGUGGUGCUAGAGUUCAAUCAGUACACUCCUGACUCGCGUUGGAGGAAGACAACUAUAAGUAGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003541663.3
ncRNA:21   GUUUUUUUGUGUAUUACGUCA   1
  *||=||||||||*||||||||
targets:1915   GAAGAAAACACAAAAUGCAGU   1935

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g28690, mitochondrial (LOC100816489), mRNA pentatricopeptide repeat-containing protein At1g28690, mitochondrial(LOC100816489) coding protein psRNATarget