ncRNA ID | novel_gma_miR3074 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:2722734-2722831 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACUGCAUUAUGUGUUUUUUUG - 21 |
Stem-loop(if miRNA) |
--A    A     --         -GGU   A  CA   --UG     A  GU    CUGC UUAUG  UGUUUUUUU    UGC GA  CAG    GUGCU GA  U    |||| |||||  |||||||||    ||| ||  |||    ||||| ||    GAUG AAUAU  ACAGAAGGA    GCG CU  GUC    CAUGA CU  C AAA    -     CA         GGUU   -  CA   CUCA     -  AA |
Stem-loop sequence | ACUGCAUUAUGUGUUUUUUUGGUUGCAGACACAGUGGUGCUAGAGUUCAAUCAGUACACUCCUGACUCGCGUUGGAGGAAGACAACUAUAAGUAGAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003541663.3 |
|
2.5 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g28690, mitochondrial (LOC100816489), mRNA | pentatricopeptide repeat-containing protein At1g28690, mitochondrial(LOC100816489) | coding protein | psRNATarget |