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BaseInfo

ncRNA ID	novel_gma_miR3072
Species	Glycine max
Class	miRNA
Genome position	Chr13:19174648-19174690 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	20
Mature sequence(if miRNA)	1 - AUUGAUUGAUUAAUUAAUUA - 20
Stem-loop(if miRNA)	-AUU                A     GAUUGAUUAAUUAAUU A     ||||||||||||||||     CUAAUUAAUUAAUUGA U UUUG                U
Stem-loop sequence	AUUGAUUGAUUAAUUAAUUAAUUAGUUAAUUAAUUAAUCGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014776610.1	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||||||||||=||||||| targets:237   UAAUUAAUUAAUUAAUCAAU   256 Target Full Sequence	1.5	PREDICTED: Glycine max glycine-rich cell wall structural protein 1.8-like (LOC100801928), transcript variant X4, mRNA	glycine-rich cell wall structural protein 1.8-like(LOC100801928)	coding protein	psRNATarget
XM_003528176.3	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||||||||||=||||||| targets:237   UAAUUAAUUAAUUAAUCAAU   256 Target Full Sequence	1.5	PREDICTED: Glycine max glycine-rich cell wall structural protein 1.8-like (LOC100801928), transcript variant X1, mRNA	glycine-rich cell wall structural protein 1.8-like(LOC100801928)	coding protein	psRNATarget
XM_006581957.2	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||||||||||=||||||| targets:237   UAAUUAAUUAAUUAAUCAAU   256 Target Full Sequence	1.5	PREDICTED: Glycine max glycine-rich cell wall structural protein 1.8-like (LOC100801928), transcript variant X3, mRNA	glycine-rich cell wall structural protein 1.8-like(LOC100801928)	coding protein	psRNATarget
XM_003533830.3	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||||||||||||||=||| targets:582   UAAUUAAUUAAUCAAUUAAU   601 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100802509 (LOC100802509), mRNA	uncharacterized LOC100802509(LOC100802509)	coding protein	psRNATarget
XM_014773626.1	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   *|=|*||||||||||||||| targets:1658   AAGUAAAUUAAUCAAUCAAU   1677 Target Full Sequence	2.0	PREDICTED: Glycine max glycerol-3-phosphate 2-O-acyltransferase 6-like (LOC100795122), mRNA	glycerol-3-phosphate 2-O-acyltransferase 6-like(LOC100795122)	coding protein	psRNATarget
XM_003538126.3	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||||||||||||||=||* targets:965   UAAUUAAUUAAUCAAUUAAG   984 Target Full Sequence	2.5	PREDICTED: Glycine max aquaporin PIP2-7 (LOC100818032), mRNA	aquaporin PIP2-7(LOC100818032)	coding protein	psRNATarget
BT095809.1	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||||||||||||||=||* targets:939   UAAUUAAUUAAUCAAUUAAG   958 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-19N2 unknown mRNA	NA	coding protein	psRNATarget
NM_001253294.1	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||||||||||||||=||* targets:939   UAAUUAAUUAAUCAAUUAAG   958 Target Full Sequence	2.5	Glycine max prolactin-induced protein (PIP), mRNA	prolactin-induced protein(PIP)	coding protein	psRNATarget
XM_006583788.2	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||||||||||=||||||* targets:1088   UAAUUAAUUAAUUAAUCAAG   1107 Target Full Sequence	2.5	PREDICTED: Glycine max (+)-neomenthol dehydrogenase-like (LOC100787800), mRNA	(+)-neomenthol dehydrogenase-like(LOC100787800)	coding protein	psRNATarget
XM_006587584.2	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||*|||*||||||||||| targets:243   UAAUCAAUCAAUCAAUCAAU   262 Target Full Sequence	2.5	PREDICTED: Glycine max SH3 domain-containing protein 2-like (LOC100819767), transcript variant X1, mRNA	SH3 domain-containing protein 2-like(LOC100819767)	coding protein	psRNATarget
BT091789.1	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||*||||||||*|||||| targets:489   UAAUCAAUUAAUCCAUCAAU   508 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-8H4 unknown mRNA	NA	coding protein	psRNATarget
NM_001249906.2	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||*||||||||*|||||| targets:488   UAAUCAAUUAAUCCAUCAAU   507 Target Full Sequence	2.5	Glycine max uncharacterized LOC100526982 (LOC100526982), mRNA	uncharacterized LOC100526982(LOC100526982)	coding protein	psRNATarget
XM_006583920.2	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   **||||||||||||||*||| targets:3835   GUAUUAAUUAAUCAAUAAAU   3854 Target Full Sequence	2.5	PREDICTED: Glycine max squamosa promoter-binding-like protein 1 (LOC100780152), transcript variant X1, mRNA	squamosa promoter-binding-like protein 1(LOC100780152)	coding protein	psRNATarget
XM_003528551.3	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   **||||||||||||||*||| targets:3729   GUAUUAAUUAAUCAAUAAAU   3748 Target Full Sequence	2.5	PREDICTED: Glycine max squamosa promoter-binding-like protein 1 (LOC100780152), transcript variant X2, mRNA	squamosa promoter-binding-like protein 1(LOC100780152)	coding protein	psRNATarget
XM_006581156.2	ncRNA:20   AUUA---AUUAAUUAGUUAGUUA   1   ||||---|||||||||||||||| targets:152   UAAUGACUAAUUAAUCAAUCAAU   174 Target Full Sequence	3.0	PREDICTED: Glycine max lysophospholipid acyltransferase LPEAT1-like (LOC100775331), transcript variant X1, mRNA	lysophospholipid acyltransferase LPEAT1-like(LOC100775331)	coding protein	psRNATarget
XM_003527652.3	ncRNA:20   AUUA---AUUAAUUAGUUAGUUA   1   ||||---|||||||||||||||| targets:152   UAAUGACUAAUUAAUCAAUCAAU   174 Target Full Sequence	3.0	PREDICTED: Glycine max lysophospholipid acyltransferase LPEAT1-like (LOC100775331), transcript variant X2, mRNA	lysophospholipid acyltransferase LPEAT1-like(LOC100775331)	coding protein	psRNATarget
XM_006586225.2	ncRNA:20   AUUAAUUAAUUAGUUAGUUA   1   ||||*|=||||||||||||* targets:1132   UAAUGAGUUAAUCAAUCAAC   1151 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100806372 (LOC100806372), mRNA	uncharacterized LOC100806372(LOC100806372)	coding protein	psRNATarget