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BaseInfo

ncRNA ID novel_gma_miR3071
Species Glycine max
Class miRNA
Genome position Chr10:43141760-43141825 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 19
Mature sequence(if miRNA) 48 - AAUUAGAAAGGCUUUUUUG - 66
Stem-loop(if miRNA) --AA         C      G        AAAA
    UUAGAAAGG UUUUUU GAAGUAUA    G
    ||||||||| |||||| ||||||||    A
    GGUUUUUCC AGAAAA UUUUAUAU    A
AUAA         -      G        GAUU
Stem-loop sequence AAUUAGAAAGGCUUUUUUGGAAGUAUAAAAAGAAUUAGUAUAUUUUGAAAAGACCUUUUUGGAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763224.1
ncRNA:19   GUUUUUUCGGAAAGAUUAA   1
  =||||||||||||||||||
targets:1286   UAAAAAAGCCUUUCUAAUU   1304

1.0 PREDICTED: Glycine max histone-lysine N-methyltransferase SUVR2-like (LOC106794992), mRNA histone-lysine N-methyltransferase SUVR2-like(LOC106794992) coding protein psRNATarget
XM_014766622.1
ncRNA:19   GUUUUUUCGGAAAGAUUAA   1
  |||||||||||||||*|||
targets:176   CAAAAAAGCCUUUCUUAUU   194

1.5 PREDICTED: Glycine max F-box protein GID2-like (LOC100794333), mRNA F-box protein GID2-like(LOC100794333) coding protein psRNATarget