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BaseInfo

ncRNA ID	novel_gma_miR3070
Species	Glycine max
Class	miRNA
Genome position	Chr13:17052780-17052821 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	20
Mature sequence(if miRNA)	23 - UCUUGAUUCAAAAAAAAAAA - 42
Stem-loop(if miRNA)	--CG              UUC     UUUUUUUGAAUUAA   A     ||||||||||||||     AAAAAAACUUAGUU   U AAAA              CUU
Stem-loop sequence	CGUUUUUUUGAAUUAAUUCAUUUCUUGAUUCAAAAAAAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014770715.1	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   ||||||||||||*||||||| targets:2356   UUUUUUUUUUUGUAUCAAGA   2375 Target Full Sequence	1.5	PREDICTED: Glycine max vacuolar protein 8-like (LOC100789140), mRNA	vacuolar protein 8-like(LOC100789140)	coding protein	psRNATarget
NM_001250749.2	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   |||||||||||||||*|||| targets:1258   UUUUUUUUUUUGAAUAAAGA   1277 Target Full Sequence	1.5	Glycine max RING finger protein (LOC100306109), mRNA	uncharacterized LOC100306109(LOC100306109)	coding protein	psRNATarget
AK245804.1	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   |||||||||||||||*|||| targets:1116   UUUUUUUUUUUGAAUAAAGA   1135 Target Full Sequence	1.5	Glycine max cDNA, clone: GMFL01-41-N08	NA	coding protein	psRNATarget
BT093881.1	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   *||||*|||||||||||||= targets:50   AUUUUAUUUUUGAAUCAAGG   69 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-17L12 unknown mRNA	NA	coding protein	psRNATarget
NM_001253058.2	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   *||||*|||||||||||||= targets:48   AUUUUAUUUUUGAAUCAAGG   67 Target Full Sequence	2.0	Glycine max chlorophyll a-b binding protein 7, chloroplastic-like (LOC100794944), mRNA	chlorophyll a-b binding protein 7, chloroplastic-like(LOC100794944)	coding protein	psRNATarget
AK285180.1	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   *||||*|||||||||||||= targets:12   AUUUUAUUUUUGAAUCAAGG   31 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-03-M05	NA	coding protein	psRNATarget
BT097941.1	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   |||||||||||||=|||||= targets:8   UUUUUUUUUUUGAGUCAAGG   27 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-16O6 unknown mRNA	NA	coding protein	psRNATarget
BT099404.1	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   ||||||||||||||||||** targets:7   UUUUUUUUUUUGAAUCAAAU   26 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-13D22 unknown mRNA	NA	coding protein	psRNATarget
XM_003532002.3	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   ||||*||||||||||=|||| targets:3287   UUUUAUUUUUUGAAUUAAGA   3306 Target Full Sequence	2.5	PREDICTED: Glycine max alpha-amylase 3, chloroplastic (LOC100788193), transcript variant X1, mRNA	alpha-amylase 3, chloroplastic(LOC100788193)	coding protein	psRNATarget
XM_014779344.1	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   ||||*||||||||||=|||| targets:2902   UUUUAUUUUUUGAAUUAAGA   2921 Target Full Sequence	2.5	PREDICTED: Glycine max alpha-amylase 3, chloroplastic (LOC100788193), transcript variant X2, mRNA	alpha-amylase 3, chloroplastic(LOC100788193)	coding protein	psRNATarget
XM_003517340.3	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   |||||||||||*|||||||= targets:1040   UUUUUUUUUUUUAAUCAAGG   1059 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100797178 (LOC100797178), mRNA	uncharacterized LOC100797178(LOC100797178)	coding protein	psRNATarget
BT098970.1	ncRNA:20   AAAAAAAAAAACUUAGUUCU   1   |||||||||||*|||||||* targets:37   UUUUUUUUUUUAAAUCAAGU   56 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-16F2 unknown mRNA	NA	coding protein	psRNATarget
BT094644.1	ncRNA:20   AAAAAAAAAAACUUAGUU-CU   1   ||||||||||||||||||-|| targets:6   UUUUUUUUUUUGAAUCAAAGA   26 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-5L8 unknown mRNA	NA	coding protein	psRNATarget