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BaseInfo

ncRNA ID novel_gma_miR3068
Species Glycine max
Class miRNA
Genome position Chr13:14793335-14793389 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 36 - AUUUUAUUAUUGGAUCAAUC - 55
Stem-loop(if miRNA) --          --C          ACA
  UUGGUCCAAU   GAGAUUGGUU   U
  ||||||||||   ||||||||||   A
  AACUAGGUUA   UUUUAAUCAA   A
CU          UUA          AUU
Stem-loop sequence UUGGUCCAAUCGAGAUUGGUUACAUAAUUAAACUAAUUUUAUUAUUGGAUCAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006574473.2
ncRNA:20   CUAACUAGGUUAUUAUUUUA   1
  ||||*||||||*||||||||
targets:1329   GAUUCAUCCAAGAAUAAAAU   1348

2.5 PREDICTED: Glycine max transcription factor MYB12-like (LOC100814275), mRNA transcription factor MYB12-like(LOC100814275) coding protein psRNATarget
XM_014761834.1
ncRNA:20   CUAACUAGGUUAUUAUUUUA   1
  ||||*|||||||||*|||||
targets:364   GAUUUAUCCAAUAACAAAAU   383

2.5 PREDICTED: Glycine max BTB/POZ domain-containing protein At5g47800-like (LOC100807132), transcript variant X8, mRNA BTB/POZ domain-containing protein At5g47800-like(LOC100807132) coding protein psRNATarget
XM_006586730.2
ncRNA:20   CUAACUAGGUUAUUAUUUUA   1
  ||||*|||||||||*|||||
targets:364   GAUUUAUCCAAUAACAAAAU   383

2.5 PREDICTED: Glycine max BTB/POZ domain-containing protein At5g47800-like (LOC100807132), transcript variant X6, mRNA BTB/POZ domain-containing protein At5g47800-like(LOC100807132) coding protein psRNATarget