Search result

BaseInfo

ncRNA ID	novel_gma_miR3066
Species	Glycine max
Class	miRNA
Genome position	Chr13:10386278-10386374 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451670;SRR1451674
Length	20
Mature sequence(if miRNA)	1 - UGCACAAUUUUGUAUUUUUU - 20
Stem-loop(if miRNA)	-------------AAC   -----   - AG  GCCAGAUUAGCGGUAUUGGCAAAU                 UUG     CUA A  UU                        U                 |||     ||| |  ||                 ACG     AGA C  CG                        U UUUUUUAUGUUUUAAC   UAUAU   U UU  UAAAUCGUAUUGUUCUUCUUUUGU
Stem-loop sequence	AACUUGCUAAAGUUGCCAGAUUAGCGGUAUUGGCAAAUUUUGUUUUCUUCUUGUUAUGCUAAAUGCUUCUAGAUAUAUGCACAAUUUUGUAUUUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006576121.2	ncRNA:20   UUUUUUAUGUUUUAACACGU   1   |=||||||||||||||*||| targets:785   AGAAAAUACAAAAUUGGGCA   804 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500222 (LOC100500222), transcript variant X3, mRNA	uncharacterized LOC100500222(LOC100500222)	coding protein	psRNATarget
XM_006576120.2	ncRNA:20   UUUUUUAUGUUUUAACACGU   1   |=||||||||||||||*||| targets:927   AGAAAAUACAAAAUUGGGCA   946 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500222 (LOC100500222), transcript variant X2, mRNA	uncharacterized LOC100500222(LOC100500222)	coding protein	psRNATarget
XM_006576119.2	ncRNA:20   UUUUUUAUGUUUUAACACGU   1   |=||||||||||||||*||| targets:1005   AGAAAAUACAAAAUUGGGCA   1024 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500222 (LOC100500222), transcript variant X1, mRNA	uncharacterized LOC100500222(LOC100500222)	coding protein	psRNATarget
XM_003554818.3	ncRNA:20   UUUUUUAUGUUUUAACACGU   1   ||=|*|*||||||||||||| targets:1569   AAGACAAACAAAAUUGUGCA   1588 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100809847 (LOC100809847), transcript variant X2, mRNA	uncharacterized LOC100809847(LOC100809847)	coding protein	psRNATarget