Search result

BaseInfo

ncRNA ID	novel_gma_miR3065
Species	Glycine max
Class	miRNA
Genome position	Chr13:14440078-14440205 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	19
Mature sequence(if miRNA)	1 - UUAACAUCAAAUUUUAAGA - 19
Stem-loop(if miRNA)	--UUCAAACCC             A  UA  A           G A      G         AA            GAUGUUAACGAAG GA  UU ACAUCGGUUUU G AAAACC AUGUUAACA  U            ||||||||||||| ||  || ||||||||||| | |||||| |||||||||            CUACAAUUGCUUC CU  AA UGUAGCCAAGA C UUUUGG UACAAUUGU  U AGAAUUUUAAA             A  GC  A           A A      A         AA
Stem-loop sequence	UUCAAACCCGAUGUUAACGAAGAGAUAUUAACAUCGGUUUUGGAAAAACCGAUGUUAACAAAUUAAUGUUAACAUAGGUUUUACAAGAACCGAUGUAAACGUCACUUCGUUAACAUCAAAUUUUAAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014772391.1	ncRNA:19   AGAAUUUUAAACUACAAUU   1   |||*|||*||||||||||| targets:1618   UCUCAAAUUUUGAUGUUAA   1636 Target Full Sequence	2.5	PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 25-like (LOC102668050), mRNA	mediator of RNA polymerase II transcription subunit 25-like(LOC102668050)	coding protein	psRNATarget
NM_001250552.2	ncRNA:19   AGAAUUUUAAACUACAAUU   1   *|||*|||||||||||||* targets:140   ACUUUAAAUUUGAUGUUAU   158 Target Full Sequence	3.0	Glycine max CASP-like protein 8 (LOC100306097), mRNA	CASP-like protein 8(LOC100306097)	coding protein	psRNATarget
BT090040.1	ncRNA:19   AGAAUUUUAAACUACAAUU   1   *|||*|||||||||||||* targets:142   ACUUUAAAUUUGAUGUUAU   160 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-3B1 unknown mRNA	NA	coding protein	psRNATarget