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BaseInfo

ncRNA ID	novel_gma_miR3057
Species	Glycine max
Class	miRNA
Genome position	Chr13:36145329-36145377 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670;SRR1451672;SRR1451676
Length	20
Mature sequence(if miRNA)	30 - AUUUGGAAAAGAAAAAAAAU - 49
Stem-loop(if miRNA)	-UA       ---     U    UGA    UUUUUUC   UCUAA AUUA   A    |||||||   ||||| ||||    AAAAAAG   AGGUU UAAU   G UAA       AAA     -    UUA
Stem-loop sequence	UAUUUUUUCUCUAAUAUUAUGAAGAUUUAAUUUGGAAAAGAAAAAAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006585221.2	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *|||||||||||||||||=| targets:595   UUUUUUUUUCUUUUCCAAGU   614 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100789264 (LOC100789264), mRNA	uncharacterized LOC100789264(LOC100789264)	coding protein	psRNATarget
BT094684.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||| targets:3   UUUUUUUUUUUUUUCCAAAU   22 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-6A3 unknown mRNA	NA	coding protein	psRNATarget
BT095206.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||| targets:3   UUUUUUUUUUUUUUCCAAAU   22 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-6P6 unknown mRNA	NA	coding protein	psRNATarget
BT095893.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||| targets:8   UUUUUUUUUUUUUUCCAAAU   27 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-20E9 unknown mRNA	NA	coding protein	psRNATarget
XM_003526901.3	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   |||||||||||||||*|||| targets:1681   AUUUUUUUUCUUUUCAAAAU   1700 Target Full Sequence	1.5	PREDICTED: Glycine max F-box/LRR-repeat protein At5g63520-like (LOC100815778), mRNA	F-box/LRR-repeat protein At5g63520-like(LOC100815778)	coding protein	psRNATarget
BT095211.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||| targets:6   UUUUUUUUUUUUUUCCAAAU   25 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-6P14 unknown mRNA	NA	coding protein	psRNATarget
XM_014762490.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||||||||*|||| targets:4005   UUUUUUUUUCUUUUCAAAAU   4024 Target Full Sequence	1.5	PREDICTED: Glycine max myosin-1 (LOC100796845), transcript variant X2, mRNA	myosin-1(LOC100796845)	coding protein	psRNATarget
XM_006587903.2	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||||||||*|||| targets:3889   UUUUUUUUUCUUUUCAAAAU   3908 Target Full Sequence	1.5	PREDICTED: Glycine max myosin-1 (LOC100796845), transcript variant X1, mRNA	myosin-1(LOC100796845)	coding protein	psRNATarget
XM_003519702.3	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||||||*|||||| targets:58   CUUUUUUUUCUUUCCCAAAU   77 Target Full Sequence	1.5	PREDICTED: Glycine max probable beta-D-xylosidase 2 (LOC100798630), mRNA	probable beta-D-xylosidase 2(LOC100798630)	coding protein	psRNATarget
XM_003539477.3	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||||||||*|||| targets:2205   UUUUUUUUUCUUUUCAAAAU   2224 Target Full Sequence	1.5	PREDICTED: Glycine max probable indole-3-acetic acid-amido synthetase GH3.5 (LOC100814683), transcript variant X1, mRNA	probable indole-3-acetic acid-amido synthetase GH3.5(LOC100814683)	coding protein	psRNATarget
XM_003523001.3	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *|||||||||*||||||||| targets:2090   UUUUUUUUUCCUUUCCAAAU   2109 Target Full Sequence	1.5	PREDICTED: Glycine max protein NUCLEAR FUSION DEFECTIVE 4 (LOC100775628), transcript variant X1, mRNA	protein NUCLEAR FUSION DEFECTIVE 4(LOC100775628)	coding protein	psRNATarget
XM_003519889.3	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *|||||||||||||||*||| targets:376   UUUUUUUUUCUUUUCCCAAU   395 Target Full Sequence	1.5	PREDICTED: Glycine max calcium-binding mitochondrial carrier protein SCaMC-3-like (LOC100777729), transcript variant X1, mRNA	calcium-binding mitochondrial carrier protein SCaMC-3-like(LOC100777729)	coding protein	psRNATarget
XM_006574678.2	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *|||||||||||||||*||| targets:378   UUUUUUUUUCUUUUCCCAAU   397 Target Full Sequence	1.5	PREDICTED: Glycine max calcium-binding mitochondrial carrier protein SCaMC-3-like (LOC100777729), transcript variant X2, mRNA	calcium-binding mitochondrial carrier protein SCaMC-3-like(LOC100777729)	coding protein	psRNATarget
XM_006592772.2	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||||||||*|||| targets:1843   UUUUUUUUUCUUUUCAAAAU   1862 Target Full Sequence	1.5	PREDICTED: Glycine max probable indole-3-acetic acid-amido synthetase GH3.5 (LOC100814683), transcript variant X2, mRNA	probable indole-3-acetic acid-amido synthetase GH3.5(LOC100814683)	coding protein	psRNATarget
XM_006573090.2	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||||||||*|||| targets:1701   UUUUUUUUUCUUUUCAAAAU   1720 Target Full Sequence	1.5	PREDICTED: Glycine max protein root UVB sensitive 3 (LOC100815127), mRNA	protein root UVB sensitive 3(LOC100815127)	coding protein	psRNATarget
XM_006583562.2	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   ||||*||||||||||||||* targets:3810   AUUUAUUUUCUUUUCCAAAG   3829 Target Full Sequence	2.0	PREDICTED: Glycine max mitogen-activated protein kinase-binding protein 1 (LOC100798924), mRNA	mitogen-activated protein kinase-binding protein 1(LOC100798924)	coding protein	psRNATarget
XM_014761828.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   ||||||||||||||=||||* targets:160   AUUUUUUUUCUUUUUCAAAG   179 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like (LOC106794528), mRNA	pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like(LOC106794528)	coding protein	psRNATarget
XM_003528799.3	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||* targets:373   UUUUUUUUUUUUUUCCAAAA   392 Target Full Sequence	2.5	PREDICTED: Glycine max ATP-dependent helicase BRM-like (LOC100793092), mRNA	ATP-dependent helicase BRM-like(LOC100793092)	coding protein	psRNATarget
AK245956.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *|||||||||||||=||||* targets:765   CUUUUUUUUCUUUUUCAAAA   784 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-47-C07	NA	coding protein	psRNATarget
XM_003555893.3	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *|||||||||||||=||||* targets:371   UUUUUUUUUCUUUUUCAAAC   390 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100794625 (LOC100794625), transcript variant X1, mRNA	uncharacterized LOC100794625(LOC100794625)	coding protein	psRNATarget
XM_006575228.2	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||* targets:127   UUUUUUUUUUUUUUCCAAAC   146 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor E2FA (LOC100811762), mRNA	transcription factor E2FA(LOC100811762)	coding protein	psRNATarget
BT098935.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||* targets:34   UUUUUUUUUUUUUUCCAAAG   53 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-26D2 unknown mRNA	NA	coding protein	psRNATarget
BT099168.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||* targets:4   UUUUUUUUUUUUUUCCAAAA   23 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-26H20 unknown mRNA	NA	coding protein	psRNATarget
BT099118.1	ncRNA:19   AAAAAAAAGAAAAGGUUUA   1   ||||||||=|||||||||* targets:1   UUUUUUUUUUUUUCCAAAA   19 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-23L15 unknown mRNA	NA	coding protein	psRNATarget
XM_003532377.3	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   ||||||||||*||||||||* targets:90   AUUUUUUUUCCUUUCCAAAA   109 Target Full Sequence	2.5	PREDICTED: Glycine max potassium transporter 3-like (LOC100819743), mRNA	potassium transporter 3-like(LOC100819743)	coding protein	psRNATarget
BT094641.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||* targets:2   UUUUUUUUUUUUUUCCAAAA   21 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-5L2 unknown mRNA	NA	coding protein	psRNATarget
BT098665.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||* targets:6   UUUUUUUUUUUUUUCCAAAA   25 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-16P3 unknown mRNA	NA	coding protein	psRNATarget
BT094853.1	ncRNA:20   UAAAAAAAAGAAAAGGUUUA   1   *||||||||=|||||||||* targets:5   UUUUUUUUUUUUUUCCAAAA   24 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-6E20 unknown mRNA	NA	coding protein	psRNATarget