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BaseInfo

ncRNA ID novel_gma_miR3056
Species Glycine max
Class miRNA
Genome position Chr13:31858667-31858714 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 1 - AAAUUAAGUAUGUAUUGACU - 20
Stem-loop(if miRNA) --AAA    -        U  CUU
     UUAA GUAUGUAU GA   G
     |||| |||||||| ||   C
     AGUU CGUGUAUA CU   A
UGUAG    A        C  AUA
Stem-loop sequence AAAUUAAGUAUGUAUUGACUUGCAAUAUCCAUAUGUGCAUUGAGAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006582933.2
ncRNA:20   UCAGUUAUGUAUGAAUUAAA   1
  =|||||*||||||||||||*
targets:2254   GGUCAAGACAUACUUAAUUC   2273

2.0 PREDICTED: Glycine max uncharacterized LOC100778731 (LOC100778731), transcript variant X3, mRNA uncharacterized LOC100778731(LOC100778731) coding protein psRNATarget
XM_014777606.1
ncRNA:20   UCAGUUAUGUAUGAAUUAAA   1
  =|||||*||||||||||||*
targets:2253   GGUCAAGACAUACUUAAUUC   2272

2.0 PREDICTED: Glycine max uncharacterized LOC100778731 (LOC100778731), transcript variant X2, mRNA uncharacterized LOC100778731(LOC100778731) coding protein psRNATarget
XM_006585528.2
ncRNA:20   UCAGUUAUGUAUGAAUUAAA   1
  =|||||*||||||||||||*
targets:2202   GGUCAAGACAUACUUAAUUC   2221

2.0 PREDICTED: Glycine max uncharacterized LOC100790491 (LOC100790491), mRNA uncharacterized LOC100790491(LOC100790491) coding protein psRNATarget
XM_003529671.3
ncRNA:20   UCAGUUAUGUAUGAAUUAAA   1
  =|||||*||||||||||||*
targets:2251   GGUCAAGACAUACUUAAUUC   2270

2.0 PREDICTED: Glycine max uncharacterized LOC100778731 (LOC100778731), transcript variant X1, mRNA uncharacterized LOC100778731(LOC100778731) coding protein psRNATarget