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BaseInfo

ncRNA ID	novel_gma_miR3054
Species	Glycine max
Class	miRNA
Genome position	Chr1:4600866-4600913 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	20
Mature sequence(if miRNA)	29 - GAAAACAUGGGCAUUGUGAG - 48
Stem-loop(if miRNA)	-----CAA      A       U  A         GCCUGU GUUUUCA AC A         |||||| ||||||| || C         CGGGUA CAAAAGU UG A GAGUGUUA      -       -  U
Stem-loop sequence	CAAGCCUGUAGUUUUCAUACAACAUGUUGAAAACAUGGGCAUUGUGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014769083.1	ncRNA:20   GAGUGUUACGGGUACAAAAG   1   =||*||||*||||||||||| targets:56   UUCCCAAUUCCCAUGUUUUC   75 Target Full Sequence	2.5	PREDICTED: Glycine max protein YLS3-like (LOC106796568), mRNA	protein YLS3-like(LOC106796568)	coding protein	psRNATarget
XM_014768583.1	ncRNA:20   GAGUGUUACGGGUACAAAAG   1   =||*||||*||||||||||| targets:164   UUCCCAAUUCCCAUGUUUUC   183 Target Full Sequence	2.5	PREDICTED: Glycine max protein YLS3-like (LOC106794241), mRNA	protein YLS3-like(LOC106794241)	coding protein	psRNATarget
XM_003519697.3	ncRNA:20   GAG-UGUUACGGGUACAAAAG   1   *||-||||||||||||||||* targets:2188   GUCGACAAUGCCCAUGUUUUG   2208 Target Full Sequence	3.0	PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100795451), transcript variant X2, mRNA	histone-lysine N-methyltransferase EZA1-like(LOC100795451)	coding protein	psRNATarget
XM_014764208.1	ncRNA:20   GAG-UGUUACGGGUACAAAAG   1   *||-||||||||||||||||* targets:2191   GUCGACAAUGCCCAUGUUUUG   2211 Target Full Sequence	3.0	PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100795451), transcript variant X1, mRNA	histone-lysine N-methyltransferase EZA1-like(LOC100795451)	coding protein	psRNATarget
XM_014774265.1	ncRNA:20   GAGUGUUACGGGUACAAAAG   1   |**||||||||||||||||* targets:1472   CCGACAAUGCCCAUGUUUUG   1491 Target Full Sequence	3.0	PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100803604), mRNA	histone-lysine N-methyltransferase EZA1-like(LOC100803604)	coding protein	psRNATarget
XM_003550360.3	ncRNA:20   GAGUGUUACGGGUACAAAAG   1   =|=||**||||||||||||| targets:1147   UUUACUCUGCCCAUGUUUUC   1166 Target Full Sequence	3.0	PREDICTED: Glycine max B-box zinc finger protein 20 (LOC100807827), mRNA	B-box zinc finger protein 20(LOC100807827)	coding protein	psRNATarget