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BaseInfo

ncRNA ID novel_gma_miR3053
Species Glycine max
Class miRNA
Genome position Chr1:52628537-52628611 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 21
Mature sequence(if miRNA) 1 - AACCAUUACACUGACUAACCC - 21
Stem-loop(if miRNA) --        U    U    GCUGAGU   U   UU  U
  GUUAGUCA GUGU AUGG       UGU AGU  AU C
  |||||||| |||| ||||       ||| |||  || C
  CAAUCAGU CACA UACC       ACG UUA  UG A
CC        -    U    ---AAAU   U   UU  A
Stem-loop sequence GUUAGUCAUGUGUUAUGGGCUGAGUUGUUAGUUUAUUCCAAGUUUAUUUGCAUAAACCAUUACACUGACUAACCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538532.3
ncRNA:21   CCCAAUCAGUCACAUUACCAA   1
  **|||*||||*||||||||||
targets:2098   UUGUUUGUCACUGUAAUGGUU   2118

2.5 PREDICTED: Glycine max ALBINO3-like protein 1, chloroplastic (LOC100815190), mRNA ALBINO3-like protein 1, chloroplastic(LOC100815190) coding protein psRNATarget