ncRNA ID | novel_gma_miR3049 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:9333094-9333217 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 20 |
Mature sequence(if miRNA) | 105 - UUGUACCCUUAUGUAUCCUU - 124 |
Stem-loop(if miRNA) |
-- UG        U       UCU   U    U        U    -       CU    U  GA   U  UACCCUUA GUAUCCU   UGA AUUA AUAUGUGU AAUC UUUUUUA  CAUU AU  A   |  |||||||| |||||||   ||| |||| |||||||| |||| |||||||  |||| ||   A  AUGGGAAU CAUAGGA   AUU UAAU UGUAUAUA UUAG AAAAGAU  GUAA UG  U CA GU        -       -UU   C    -        U    C       -U    -  AC |
Stem-loop sequence | UUGUACCCUUAUGUAUCCUUCUUGAUAUUAUAUAUGUGUUAAUCUUUUUUACUCAUUUAUGAAUCAGUAAUGUUAGAAAACGAUUUAUAUAUGUUAAUCUUAUUAGGAUACUAAGGGUAUGAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003541593.3 |
|
2.0 | PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 7-like (LOC100816656), mRNA | protein FAR1-RELATED SEQUENCE 7-like(LOC100816656) | coding protein | psRNATarget |