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BaseInfo

ncRNA ID novel_gma_miR3049
Species Glycine max
Class miRNA
Genome position Chr12:9333094-9333217 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 105 - UUGUACCCUUAUGUAUCCUU - 124
Stem-loop(if miRNA) -- UG        U       UCU   U    U        U    -       CU    U  GA
  U  UACCCUUA GUAUCCU   UGA AUUA AUAUGUGU AAUC UUUUUUA  CAUU AU  A
  |  |||||||| |||||||   ||| |||| |||||||| |||| |||||||  |||| ||
  A  AUGGGAAU CAUAGGA   AUU UAAU UGUAUAUA UUAG AAAAGAU  GUAA UG  U
CA GU        -       -UU   C    -        U    C       -U    -  AC
Stem-loop sequence UUGUACCCUUAUGUAUCCUUCUUGAUAUUAUAUAUGUGUUAAUCUUUUUUACUCAUUUAUGAAUCAGUAAUGUUAGAAAACGAUUUAUAUAUGUUAAUCUUAUUAGGAUACUAAGGGUAUGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003541593.3
ncRNA:20   UUCCUAUGUAUUCCCAUGUU   1
  *||*||*|||||||||||||
targets:723   CAGCAUUCAUAAGGGUACAA   742

2.0 PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 7-like (LOC100816656), mRNA protein FAR1-RELATED SEQUENCE 7-like(LOC100816656) coding protein psRNATarget