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BaseInfo

ncRNA ID	novel_gma_miR3042
Species	Glycine max
Class	miRNA
Genome position	Chr18:45693849-45693950 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451668
Length	20
Mature sequence(if miRNA)	83 - AUGGAUGAUUAGAGAAAUAA - 102
Stem-loop(if miRNA)	--  G             --A      U    U  AAUUUUCCA   U   G   AU GAUGAUUAGAGAA   UAAUUU GUUA AG         CGU UAA A   || |||||||||||||   |||||| |||| ||         ||| |||   UA CUAUUGAUUUCUU   AUUGAG UAAU UC         GCG AUU A UG  G             CAG      U    U  CUCUACUCG   U   A
Stem-loop sequence	AUGGAUGAUUAGAGAAAUAAUUUUGUUAUAGAAUUUUCCACGUUUAAGAAAUUAUGCGGCUCAUCUCCUUUAAUUGAGUUAGACUUCUUUAGUUAUCGAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003546189.3	ncRNA:20   AAUAAAGAGAUUAGUAGGUA   1   ||||||*|||||||*||||| targets:9   UUAUUUAUCUAAUCUUCCAU   28 Target Full Sequence	2.5	PREDICTED: Glycine max BOI-related E3 ubiquitin-protein ligase 1 (LOC100797512), mRNA	BOI-related E3 ubiquitin-protein ligase 1(LOC100797512)	coding protein	psRNATarget
XM_006593998.2	ncRNA:20   AAUAAAGAGAUUAGUAGGUA   1   **||||||||*||||||||| targets:228   CAAUUUCUCUCAUCAUCCAU   247 Target Full Sequence	2.5	PREDICTED: Glycine max receptor-like serine/threonine-protein kinase ALE2 (LOC100784243), transcript variant X3, mRNA	receptor-like serine/threonine-protein kinase ALE2(LOC100784243)	coding protein	psRNATarget
XM_003541331.3	ncRNA:20   AAUAAAGAGAUUAGUAGGUA   1   **||||||||*||||||||| targets:228   CAAUUUCUCUCAUCAUCCAU   247 Target Full Sequence	2.5	PREDICTED: Glycine max receptor-like serine/threonine-protein kinase ALE2 (LOC100784243), transcript variant X2, mRNA	receptor-like serine/threonine-protein kinase ALE2(LOC100784243)	coding protein	psRNATarget
XM_006593997.2	ncRNA:20   AAUAAAGAGAUUAGUAGGUA   1   **||||||||*||||||||| targets:228   CAAUUUCUCUCAUCAUCCAU   247 Target Full Sequence	2.5	PREDICTED: Glycine max receptor-like serine/threonine-protein kinase ALE2 (LOC100784243), transcript variant X1, mRNA	receptor-like serine/threonine-protein kinase ALE2(LOC100784243)	coding protein	psRNATarget