ncRNA ID | novel_gma_miR3035 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:44325546-44325613 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451667;SRR1451668;SRR1451679;SRR1451680 |
Length | 20 |
Mature sequence(if miRNA) | 1 - ACAGUCCAUCUUGGCAAAGC - 20 |
Stem-loop(if miRNA) |
AC       CU     ----      ---AAA    U   AGUCCAU  UGGCA    AAGCUA      ACUC C   |||||||  |||||    ||||||      |||| A   UCAGGUA  AUCGU    UUCGAU      UGGG A AC       --     AAGU      CGGUAA    U |
Stem-loop sequence | ACAGUCCAUCUUGGCAAAGCUAAAAACUCUCAAUGGGUAAUGGCUAGCUUUGAAUGCUAAUGGACUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT092794.1 |
|
2.5 | Soybean clone JCVI-FLGm-11D2 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001254076.2 |
|
2.5 | Glycine max 40S ribosomal protein S3a-like (LOC100805519), mRNA | 40S ribosomal protein S3a-like(LOC100805519) | coding protein | psRNATarget | |||||||||
BT098700.1 |
|
2.5 | Soybean clone JCVI-FLGm-23I10 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
BT093927.1 |
|
2.5 | Soybean clone JCVI-FLGm-17N24 unknown mRNA | NA | coding protein | psRNATarget |