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BaseInfo

ncRNA ID novel_gma_miR3034
Species Glycine max
Class miRNA
Genome position Chr18:4242934-4243023 [+]
Reference genome Glycine_max_v2.0
Source SRR1451667
Length 20
Mature sequence(if miRNA) 1 - GUAUGUUUUGGACUUUUGGU - 20
Stem-loop(if miRNA) --  A G      A    UG  AGAUUCAUGAAG UG      GA C  GU
  GU U UUUUGG CUUU  GU            U  AGACUG  C GA  U
  || | |||||| ||||  ||            |  ||||||  | ||
  CG A AAGAUC GAGA  CG            A  UUUGAC  G CU  U
UA  A G      C    GU  -----------A GU      -A U  AU
Stem-loop sequence GUAUGUUUUGGACUUUUGGUAGAUUCAUGAAGUUGAGACUGGACCGAGUUUUAUCUGACAGUUUUGAAGCUGAGAGCCUAGAAGAAGCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003555648.3
ncRNA:20   UGGUUUUCAGGUUUUGUAUG   1
  |||=|||||||||||||*||
targets:75   ACCGAAAGUCCAAAACAGAC   94

2.5 PREDICTED: Glycine max exocyst complex component EXO70A1-like (LOC100797989), mRNA exocyst complex component EXO70A1-like(LOC100797989) coding protein psRNATarget
XM_003535900.3
ncRNA:20   UGGUUUUCAGGUUUUGUAUG   1
  |||=|||||||||||||*||
targets:67   ACCGAAAGUCCAAAACAGAC   86

2.5 PREDICTED: Glycine max exocyst complex component EXO70A1 (LOC100775958), mRNA exocyst complex component EXO70A1(LOC100775958) coding protein psRNATarget