ncRNA ID | novel_gma_miR3034 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:4242934-4243023 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451667 |
Length | 20 |
Mature sequence(if miRNA) | 1 - GUAUGUUUUGGACUUUUGGU - 20 |
Stem-loop(if miRNA) |
--  A G      A    UG  AGAUUCAUGAAG UG      GA C  GU   GU U UUUUGG CUUU  GU            U  AGACUG  C GA  U   || | |||||| ||||  ||            |  ||||||  | ||   CG A AAGAUC GAGA  CG            A  UUUGAC  G CU  U UA  A G      C    GU  -----------A GU      -A U  AU |
Stem-loop sequence | GUAUGUUUUGGACUUUUGGUAGAUUCAUGAAGUUGAGACUGGACCGAGUUUUAUCUGACAGUUUUGAAGCUGAGAGCCUAGAAGAAGCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003555648.3 |
|
2.5 | PREDICTED: Glycine max exocyst complex component EXO70A1-like (LOC100797989), mRNA | exocyst complex component EXO70A1-like(LOC100797989) | coding protein | psRNATarget | |||||||||
XM_003535900.3 |
|
2.5 | PREDICTED: Glycine max exocyst complex component EXO70A1 (LOC100775958), mRNA | exocyst complex component EXO70A1(LOC100775958) | coding protein | psRNATarget |