ncRNA ID | novel_gma_miR3027 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:4324256-4324331 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451667 |
Length | 19 |
Mature sequence(if miRNA) | 58 - GACUUUCAUGGUUUGGGGG - 76 |
Stem-loop(if miRNA) |
--   UU    -    UG   G      AUGUA     UU   GAC  UCAU GGUU  GGG CAAAUU     UGACU  C   |||  |||| ||||  ||| ||||||     |||||   CUG  GGUA UUAA  UCC GUUUAA     AUUGG  U UC   -U    A    UU   G      --GAA     GC |
Stem-loop sequence | GACUUUCAUGGUUUGGGGGCAAAUUAUGUAUGACUUUCUCGGGUUAAAGAAUUUGGCCUUUAAUUAAUGGUGUCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771917.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100804859 (LOC100804859), transcript variant X8, mRNA | uncharacterized LOC100804859(LOC100804859) | coding protein | psRNATarget | |||||||||
XM_014771911.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100804859 (LOC100804859), transcript variant X2, mRNA | uncharacterized LOC100804859(LOC100804859) | coding protein | psRNATarget |