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BaseInfo

ncRNA ID novel_gma_miR3026
Species Glycine max
Class miRNA
Genome position Chr12:7400391-7400469 [-]
Reference genome Glycine_max_v2.0
Source SRR1451667
Length 20
Mature sequence(if miRNA) 60 - GUUUUGGUUGUAGCAGUCGC - 79
Stem-loop(if miRNA) --          U  -CA    -   AAA     AU    U
  GUUUUGGUUG AG   GUCG CAC   AAUAU  GUAU G
  |||||||||| ||   |||| |||   |||||  ||||
  UAAGAUUAGU UC   CAGU GUG   UUGUG  UAUG U
GG          U  UUG    A   -AC     AC    U
Stem-loop sequence GUUUUGGUUGUAGCAGUCGCACAAAAAUAUAUGUAUUGUUGUAUCAGUGUUCAGUGAUGACGUUCUUUGAUUAGAAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006585042.2
ncRNA:20   CGCUGACGAUGUUGGUUUUG   1
  ||*|||||||||||||*|||
targets:1351   GCAACUGCUACAACCACAAC   1370

2.5 PREDICTED: Glycine max ATP-dependent DNA helicase Q-like 5 (LOC100811214), mRNA ATP-dependent DNA helicase Q-like 5(LOC100811214) coding protein psRNATarget
XM_003539361.3
ncRNA:20   CGCUGACGAUGUUGGUUUUG   1
  ***|=|||||||||||||||
targets:1056   UGAAUUGCUACAACCAAAAC   1075

3.0 PREDICTED: Glycine max NAC domain-containing protein 2-like (LOC100777776), mRNA NAC domain-containing protein 2-like(LOC100777776) coding protein psRNATarget