ncRNA ID | novel_gma_miR3026 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:7400391-7400469 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451667 |
Length | 20 |
Mature sequence(if miRNA) | 60 - GUUUUGGUUGUAGCAGUCGC - 79 |
Stem-loop(if miRNA) |
--          U  -CA    -   AAA     AU    U   GUUUUGGUUG AG   GUCG CAC   AAUAU  GUAU G   |||||||||| ||   |||| |||   |||||  ||||   UAAGAUUAGU UC   CAGU GUG   UUGUG  UAUG U GG          U  UUG    A   -AC     AC    U |
Stem-loop sequence | GUUUUGGUUGUAGCAGUCGCACAAAAAUAUAUGUAUUGUUGUAUCAGUGUUCAGUGAUGACGUUCUUUGAUUAGAAUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006585042.2 |
|
2.5 | PREDICTED: Glycine max ATP-dependent DNA helicase Q-like 5 (LOC100811214), mRNA | ATP-dependent DNA helicase Q-like 5(LOC100811214) | coding protein | psRNATarget | |||||||||
XM_003539361.3 |
|
3.0 | PREDICTED: Glycine max NAC domain-containing protein 2-like (LOC100777776), mRNA | NAC domain-containing protein 2-like(LOC100777776) | coding protein | psRNATarget |