Search result

BaseInfo

ncRNA ID novel_gma_miR3023
Species Glycine max
Class miRNA
Genome position Chr8:15848983-15849028 [+]
Reference genome Glycine_max_v2.0
Source SRR1451667;SRR1451672;SRR1451608
Length 21
Mature sequence(if miRNA) 26 - CUGCGGUGAUGAGGCUCUAAC - 46
Stem-loop(if miRNA) --UU       --U   A   AG  
    GGGCUUU   GCC GCA  GCU
    |||||||   ||| |||  ||C
    CUCGGAG   UGG CGU  CGA
CAAU       UAG   -   --  
Stem-loop sequence UUGGGCUUUUGCCAGCAAGGCUCAGCUGCGGUGAUGAGGCUCUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003539023.3
ncRNA:21   CAAUCUCGGAGUAGUGGCGUC   1
  ***|*|||||||||||||||*
targets:1157   ACAACAGCCUCAUCACCGCAC   1177

3.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g01570 (LOC100788992), mRNA pentatricopeptide repeat-containing protein At4g01570(LOC100788992) coding protein psRNATarget