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BaseInfo

ncRNA ID	novel_gma_miR3005
Species	Glycine max
Class	miRNA
Genome position	Chr19:47281657-47281734 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451666;SRR1451668
Length	20
Mature sequence(if miRNA)	1 - UCUGUCUCUUUCCUAUUCCA - 20
Stem-loop(if miRNA)	GA    --A        G   UCU       -CUAC  UCA   GGAG   GAAAGAGA AGA   GUUAGGG     GC   U   ||||   |||||||| |||   |||||||     ||   G   CCUU   CUUUCUCU UCU   CGGUCCC     CG   C -A    AUC        G   ---       UUCUC  UCA
Stem-loop sequence	GAGGAGAGAAAGAGAGAGAUCUGUUAGGGCUACGCUCAUGCACUGCCUCUUCCCUGGCUCUGUCUCUUUCCUAUUCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003527040.3	ncRNA:20   ACCUUAUCCUUUCUCUGUCU   1   |*|||||||||||||||||| targets:1188   UAGAAUAGGAAAGAGACAGA   1207 Target Full Sequence	1.0	PREDICTED: Glycine max expansin-A15-like (LOC100799075), mRNA	expansin-A15-like(LOC100799075)	coding protein	psRNATarget
XM_014772656.1	ncRNA:20   ACCUUAUCCUUUCUCUGUCU   1   *||||*||||||||||=||| targets:1299   GGGAAAAGGAAAGAGAUAGA   1318 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein kinase prpf4B-like (LOC100776908), transcript variant X3, mRNA	serine/threonine-protein kinase prpf4B-like(LOC100776908)	coding protein	psRNATarget
XM_014763422.1	ncRNA:20   ACCUUAUCCUUUCUCUGUCU   1   *||||*||||||||||=||| targets:1323   GGGAAAAGGAAAGAGAUAGA   1342 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein kinase prpf4B-like (LOC100784523), transcript variant X5, mRNA	serine/threonine-protein kinase prpf4B-like(LOC100784523)	coding protein	psRNATarget
XM_003550199.2	ncRNA:20   ACCUUAUCCUUUCUCUGUCU   1   |||||*|||||||||||*|| targets:384   UGGAAGAGGAAAGAGACUGA   403 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor BEE 1-like (LOC100809974), mRNA	transcription factor BEE 1-like(LOC100809974)	coding protein	psRNATarget
XM_003524006.3	ncRNA:20   ACCUUAUCCUUUCUCUGUCU   1   ||*|=|=||||||||||||| targets:58   UGAAGUGGGAAAGAGACAGA   77 Target Full Sequence	3.0	PREDICTED: Glycine max probable iron/ascorbate oxidoreductase DDB_G0283291 (LOC100782970), mRNA	probable iron/ascorbate oxidoreductase DDB_G0283291(LOC100782970)	coding protein	psRNATarget