ncRNA ID | novel_gma_miR2995 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:41700944-41701010 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451666;SRR1451670;SRR1451676;SRR1451680;SRR1451681 |
Length | 21 |
Mature sequence(if miRNA) | 47 - ACAGUCCAUCUUGGCAAAGCU - 67 |
Stem-loop(if miRNA) |
AC       CU     ----      A ---A    U   AGUCCAU  UGGCA    AAGCUA A    ACUC A   |||||||  |||||    |||||| |    ||||   UCAGGUA  AUCGU    UUCGAU U    UGGG A AC       --     AAGU      C GUAA    U |
Stem-loop sequence | ACAGUCCAUCUUGGCAAAGCUAAAAACUCUAAUGGGUAAUGUCUAGCUUUGAAUGCUAAUGGACUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT092794.1 |
|
2.5 | Soybean clone JCVI-FLGm-11D2 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001254076.2 |
|
2.5 | Glycine max 40S ribosomal protein S3a-like (LOC100805519), mRNA | 40S ribosomal protein S3a-like(LOC100805519) | coding protein | psRNATarget | |||||||||
BT098700.1 |
|
2.5 | Soybean clone JCVI-FLGm-23I10 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
BT093927.1 |
|
2.5 | Soybean clone JCVI-FLGm-17N24 unknown mRNA | NA | coding protein | psRNATarget |