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BaseInfo

ncRNA ID novel_gma_miR2995
Species Glycine max
Class miRNA
Genome position Chr10:41700944-41701010 [-]
Reference genome Glycine_max_v2.0
Source SRR1451666;SRR1451670;SRR1451676;SRR1451680;SRR1451681
Length 21
Mature sequence(if miRNA) 47 - ACAGUCCAUCUUGGCAAAGCU - 67
Stem-loop(if miRNA) AC       CU     ----      A ---A    U
  AGUCCAU  UGGCA    AAGCUA A    ACUC A
  |||||||  |||||    |||||| |    ||||
  UCAGGUA  AUCGU    UUCGAU U    UGGG A
AC       --     AAGU      C GUAA    U
Stem-loop sequence ACAGUCCAUCUUGGCAAAGCUAAAAACUCUAAUGGGUAAUGUCUAGCUUUGAAUGCUAAUGGACUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT092794.1
ncRNA:21   UCGAAACGGUUCUACCUGACA   1
  **|||||||||||*||||||*
targets:124   CCCUUUGCCAAGAAGGACUGG   144

2.5 Soybean clone JCVI-FLGm-11D2 unknown mRNA NA coding protein psRNATarget
NM_001254076.2
ncRNA:21   UCGAAACGGUUCUACCUGACA   1
  **|||||||||||*||||||*
targets:126   CCCUUUGCCAAGAAGGACUGG   146

2.5 Glycine max 40S ribosomal protein S3a-like (LOC100805519), mRNA 40S ribosomal protein S3a-like(LOC100805519) coding protein psRNATarget
BT098700.1
ncRNA:21   UCGAAACGGUUCUACCUGACA   1
  **|||||||||||*||||||*
targets:128   CCCUUUGCCAAGAAGGACUGG   148

2.5 Soybean clone JCVI-FLGm-23I10 unknown mRNA NA coding protein psRNATarget
BT093927.1
ncRNA:21   UCGAAACGGUUCUACCUGACA   1
  **|||||||||||*||||||*
targets:205   CCCUUUGCCAAGAAGGACUGG   225

2.5 Soybean clone JCVI-FLGm-17N24 unknown mRNA NA coding protein psRNATarget