ncRNA ID | novel_gma_miR2993 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:9580285-9580368 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451666 |
Length | 19 |
Mature sequence(if miRNA) | 66 - AGAAGUGAUCUUUGCAUGA - 84 |
Stem-loop(if miRNA) |
--U  UG      --    ---U   CUUUUACUUAGUUAUACA    UG  AGGAUU  UUCU    UUC                  G    ||  ||||||  ||||    |||                  U    AC  UUCUAG  AAGA    UAU                  A AGU  GU      UG    CGAA   AAACAGGUGACAAGGUUA |
Stem-loop sequence | UUGUGAGGAUUUUCUUUUCCUUUUACUUAGUUAUACAGUAAUUGGAACAGUGGACAAAUAUAAGCAGAAGUGAUCUUUGCAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003556027.3 |
|
2.0 | PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 7-like (LOC100820207), mRNA | DEAD-box ATP-dependent RNA helicase 7-like(LOC100820207) | coding protein | psRNATarget | |||||||||
XM_003536450.2 |
|
2.0 | PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 7-like (LOC100805921), mRNA | DEAD-box ATP-dependent RNA helicase 7-like(LOC100805921) | coding protein | psRNATarget | |||||||||
XM_006604078.2 |
|
2.5 | PREDICTED: Glycine max putative nuclease HARBI1 (LOC102660080), mRNA | putative nuclease HARBI1(LOC102660080) | coding protein | psRNATarget |