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BaseInfo

ncRNA ID novel_gma_miR2984
Species Glycine max
Class miRNA
Genome position Chr3:39198187-39198227 [-]
Reference genome Glycine_max_v2.0
Source SRR1451665;SRR1451666;SRR1451667;SRR1451668;SRR1451669;SRR1451674;SRR1451678;SRR1451679;SRR1451680;SRR1451681
Length 20
Mature sequence(if miRNA) 22 - GAUUUGAUGGUUUGGAAUGC - 41
Stem-loop(if miRNA) --     G        -   U
  GAUUU AUGGUUUG GAA G
  ||||| |||||||| ||| C
  CUGAG UAUUAGAU CUU A
UU     -        U   U
Stem-loop sequence GAUUUGAUGGUUUGGAAUGCAUUUCUUAGAUUAUGAGUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768465.1
ncRNA:20   CGUAAGGUUUGGUAGUUUAG   1
  *|||*||||||||||||||*
targets:25   UCAUCCCAAACCAUCAAAUG   44

2.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100782506), transcript variant X2, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100782506) coding protein psRNATarget
XM_003548270.3
ncRNA:20   CGUAAGGUUUGGUAGUUUAG   1
  *|||*||||||||||||||*
targets:251   UCAUCCCAAACCAUCAAAUG   270

2.0 PREDICTED: Glycine max probable cyclic nucleotide-gated ion channel 20, chloroplastic (LOC100782506), transcript variant X1, mRNA probable cyclic nucleotide-gated ion channel 20, chloroplastic(LOC100782506) coding protein psRNATarget
XM_014772553.1
ncRNA:20   CGUAAGGUUUGGUAGUUUAG   1
  |*||||*||||||||||||*
targets:825   GGAUUCAAAACCAUCAAAUG   844

3.0 PREDICTED: Glycine max monocopper oxidase-like protein SKS1 (LOC100798864), mRNA monocopper oxidase-like protein SKS1(LOC100798864) coding protein psRNATarget