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BaseInfo

ncRNA ID novel_gma_miR2981
Species Glycine max
Class miRNA
Genome position Chr2:8521192-8521259 [-]
Reference genome Glycine_max_v2.0
Source SRR1451665;SRR1451669;SRR1451670;SRR1451680
Length 21
Mature sequence(if miRNA) 48 - AUACCAGACAUAGUCAGGUGU - 68
Stem-loop(if miRNA) --A          A  -CA   G       U   U
   UACCAGACAU GU   GGU UCUGCCA GUU G
   |||||||||| ||   ||| ||||||| |||
   AUGGUCUGUA CA   UCA AGAUGGU UAA G
UAC          -  UUG   G       U   A
Stem-loop sequence AUACCAGACAUAGUCAGGUGUCUGCCAUGUUUGGAAAUUUGGUAGAGACUGUUACAUGUCUGGUACAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771028.1
ncRNA:21   UGUGGACUGAUACAGACCAUA   1
  =||=||**|||||||||||||
targets:1071   GCAUCUACCUAUGUCUGGUAU   1091

3.0 PREDICTED: Glycine max branchpoint-bridging protein-like (LOC102668428), transcript variant X3, mRNA branchpoint-bridging protein-like(LOC102668428) coding protein psRNATarget
XM_006601810.2
ncRNA:21   UGUGGACUGAUACAGACCAUA   1
  =||=||**|||||||||||||
targets:1609   GCAUCUACCUAUGUCUGGUAU   1629

3.0 PREDICTED: Glycine max branchpoint-bridging protein-like (LOC102668428), transcript variant X2, mRNA branchpoint-bridging protein-like(LOC102668428) coding protein psRNATarget
XM_006601809.2
ncRNA:21   UGUGGACUGAUACAGACCAUA   1
  =||=||**|||||||||||||
targets:1611   GCAUCUACCUAUGUCUGGUAU   1631

3.0 PREDICTED: Glycine max branchpoint-bridging protein-like (LOC102668428), transcript variant X1, mRNA branchpoint-bridging protein-like(LOC102668428) coding protein psRNATarget