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BaseInfo

ncRNA ID	novel_gma_miR2971
Species	Glycine max
Class	miRNA
Genome position	Chr18:476302-476359 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451665;SRR1451666
Length	20
Mature sequence(if miRNA)	39 - UCGUGUUCGUGUUCAUGUUC - 58
Stem-loop(if miRNA)	--  G    CG      U    AUAUAUA   UC UGUU  UGUUCA GUUC       C   || ||||  |||||| ||||       C   AG ACAG  GCAAGU UAAG       C CG  A    -A      U    AAGUCAG
Stem-loop sequence	UCGUGUUCGUGUUCAUGUUCAUAUAUACCCGACUGAAGAAUUUGAACGAGACAAGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003544178.3	ncRNA:20   CUUGUACUUGUGCUUGUGCU   1   *=|||||||||||||||||| targets:753   AGACAUGAACACGAACACGA   772 Target Full Sequence	1.0	PREDICTED: Glycine max RING-H2 finger protein ATL34-like (LOC100814384), mRNA	RING-H2 finger protein ATL34-like(LOC100814384)	coding protein	psRNATarget
XM_003523408.3	ncRNA:20   CUUGUACUUGUGCUUGUGCU   1   |||||*|||||||||||||| targets:451   GAACACGAACACGAACACGA   470 Target Full Sequence	1.0	PREDICTED: Glycine max phosphatidylinositol 4-phosphate 5-kinase 4-like (LOC100814152), mRNA	phosphatidylinositol 4-phosphate 5-kinase 4-like(LOC100814152)	coding protein	psRNATarget
XM_003524589.3	ncRNA:20   CUUGUACUUGUGCUUGUGCU   1   **|||||||||||||||||| targets:118   ACACAUGAACACGAACACGA   137 Target Full Sequence	1.0	PREDICTED: Glycine max general transcription factor IIF subunit 2-like (LOC100790941), mRNA	general transcription factor IIF subunit 2-like(LOC100790941)	coding protein	psRNATarget
XM_003533511.3	ncRNA:20   CUUGUACUUGUGCUUGUGCU   1   *||||*|||||||*|||||| targets:1191   UAACACGAACACGUACACGA   1210 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g19890 (LOC100798435), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At4g19890(LOC100798435)	coding protein	psRNATarget
XM_006587713.2	ncRNA:20   CUUGUACUUGUGCUUGUGCU   1   *||||*|||||||*|||||| targets:1191   UAACACGAACACGUACACGA   1210 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g19890 (LOC100798435), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At4g19890(LOC100798435)	coding protein	psRNATarget
XM_006587714.2	ncRNA:20   CUUGUACUUGUGCUUGUGCU   1   *||||*|||||||*|||||| targets:1191   UAACACGAACACGUACACGA   1210 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g19890 (LOC100798435), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At4g19890(LOC100798435)	coding protein	psRNATarget
XM_006585778.2	ncRNA:20   CUUGUACUUGUGCUUGUGCU   1   ||*=*||||||||||||||| targets:621   GAUUUUGAACACGAACACGA   640 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC102664834 (LOC102664834), mRNA	uncharacterized LOC102664834(LOC102664834)	coding protein	psRNATarget