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BaseInfo

ncRNA ID novel_gma_miR2968
Species Glycine max
Class miRNA
Genome position Chr16:25745205-25745245 [+]
Reference genome Glycine_max_v2.0
Source SRR1451665
Length 20
Mature sequence(if miRNA) 22 - UCCACAUGGACUUUGGUUGU - 41
Stem-loop(if miRNA) --   G        A   UU
  AAU GAAGUCUA GUG  G
  ||| |||||||| |||  A
  UUG UUUCAGGU CAC  A
UG   G        A   CU
Stem-loop sequence AAUGGAAGUCUAAGUGUUGAAUCCACAUGGACUUUGGUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774168.1
ncRNA:20   UGUUGGUUUCAGGUACACCU   1
  ||||*|||||||=|||||||
targets:115   ACAAACAAAGUCUAUGUGGA   134

2.5 PREDICTED: Glycine max uncharacterized LOC106798195 (LOC106798195), mRNA uncharacterized LOC106798195(LOC106798195) coding protein psRNATarget
XM_003548201.3
ncRNA:20   UGUUGGUUUCAGGUACACCU   1
  *|||=||||||||||||*||
targets:123   CCAAUCAAAGUCCAUGUUGA   142

2.5 PREDICTED: Glycine max chlorophyll a-b binding protein CP26, chloroplastic (LOC100789786), mRNA chlorophyll a-b binding protein CP26, chloroplastic(LOC100789786) coding protein psRNATarget