ncRNA ID | novel_gma_miR2957 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:32898524-32898608 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451664 |
Length | 22 |
Mature sequence(if miRNA) | 64 - CUGAAGGACCGAUGUAGAAUAC - 85 |
Stem-loop(if miRNA) |
--           A    G            UCA     UGC   AUUCUACAUCG UCCU CAGUUGUGACCG   UAGAA   U   ||||||||||| |||| ||||||||||||   |||||   A   UAAGAUGUAGC AGGA GUCAACACUGGC   AUCUU   A CA           C    A            UAC     UUU |
Stem-loop sequence | AUUCUACAUCGAUCCUGCAGUUGUGACCGUCAUAGAAUGCUAAUUUUUCUACAUCGGUCACAACUGAAGGACCGAUGUAGAAUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583907.2 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC102668119 (LOC102668119), transcript variant X1, mRNA | uncharacterized LOC102668119(LOC102668119) | coding protein | psRNATarget | |||||||||
XM_003516565.3 |
|
2.5 | PREDICTED: Glycine max aspartic proteinase nepenthesin-1-like (LOC100804268), mRNA | aspartic proteinase nepenthesin-1-like(LOC100804268) | coding protein | psRNATarget |