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BaseInfo

ncRNA ID novel_gma_miR2949
Species Glycine max
Class miRNA
Genome position Chr10:31294023-31294163 [+]
Reference genome Glycine_max_v2.0
Source SRR1294485
Length 24
Mature sequence(if miRNA) 1 - UUAAGUGAUGACGUGACAGAUAGA - 24
Stem-loop(if miRNA) --                C     G  A    CA        CU     C              UCUCGU
  UUAAGUGAUGACGUGA AGAUA AG GUCA  UCAUUAAG  UAAUC UUGACAUGUCAUUG      U
  |||||||||||||||| ||||| || ||||  ||||||||  ||||| ||||||||||||||      A
  AAUUCACUACUGCACU UUUGU UC CAGU  AGUAAUUC  AUUAG GACUGUGCAGUAAC      U
GU                A     A  A    AC        AG     U              CUCUAC
Stem-loop sequence UUAAGUGAUGACGUGACAGAUAGAGAGUCACAUCAUUAAGCUUAAUCCUUGACAUGUCAUUGUCUCGUUAUCAUCUCCAAUGACGUGUCAGUGAUUAGACUUAAUGACAUGACACUAUGUUUAUCACGUCAUCACUUAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766262.1
ncRNA:24   AGAUAGACAGUGCAGUAGUGAAUU   1
  |||=|=|*||||||||||||||||
targets:760   UCUGUUUAUCACGUCAUCACUUAA   783

2.0 PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA uncharacterized LOC100804377(LOC100804377) coding protein psRNATarget