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BaseInfo

ncRNA ID novel_gma_miR2943
Species Glycine max
Class miRNA
Genome position Chr1:34439272-34439331 [-]
Reference genome Glycine_max_v2.0
Source SRR1451664
Length 21
Mature sequence(if miRNA) 40 - UUUUCGGAAGAAGGGUUCUUC - 60
Stem-loop(if miRNA) --               -        GAAG
  UUUUCGGAAGAAGGG UUCUUCCG    C
  ||||||||||||||| ||||||||    A
  AAAGGCCUUCUUCCC AAGAAGGC    C
UG               C        AUUU
Stem-loop sequence UUUUCGGAAGAAGGGUUCUUCCGGAAGCACUUUACGGAAGAACCCCUUCUUCCGGAAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006603347.1
ncRNA:21   CUUCUUGGGAAGAAGGCUUUU   1
  |||||||||||||||||=|||
targets:82   GAAGAACCCUUCUUCCGGAAA   102

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102662497), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102662497) coding protein psRNATarget
XM_014772428.1
ncRNA:21   CUUCUUGGGAAGAAGGCUUUU   1
  |||||||||||||||||=||*
targets:131   GAAGAACCCUUCUUCCGGAAC   151

2.5 PREDICTED: Glycine max uncharacterized LOC102661169 (LOC102661169), mRNA uncharacterized LOC102661169(LOC102661169) coding protein psRNATarget