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BaseInfo

ncRNA ID novel_gma_miR2940
Species Glycine max
Class miRNA
Genome position Chr5:36163637-36163729 [+]
Reference genome Glycine_max_v2.0
Source SRR1451664
Length 24
Mature sequence(if miRNA) 70 - AAGAAAAUGAAUGAUGAGGAUGAG - 93
Stem-loop(if miRNA) --        C             A              U   A  
  CAUCCUCA CAUUCAUUUUCUU AGAUCUAAUGGUUG AAU AGU
  |||||||| ||||||||||||| |||||||||||||| ||| ||A
  GUAGGAGU GUAAGUAAAAGAA UUUAGAUUACCAAU UUA UCA
GA        A             C              U   A  
Stem-loop sequence CAUCCUCACCAUUCAUUUUCUUAAGAUCUAAUGGUUGUAAUAAGUAACUAAUUUUAACCAUUAGAUUUCAAGAAAAUGAAUGAUGAGGAUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003546937.3
ncRNA:24   GAGUAGGAGUAGUAAGUAAAAGAA   1
  *|*||=||=||||||||||||||*
targets:233   AUAAUUCUUAUCAUUCAUUUUCUC   256

3.0 PREDICTED: Glycine max electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (LOC100807623), mRNA electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial(LOC100807623) coding protein psRNATarget